Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N23
         (915 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical ...    29   3.5  
AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical...    29   3.5  
Z78413-7|CAB01657.1|  352|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AC006809-3|AAY86286.1|  558|Caenorhabditis elegans Hypothetical ...    29   6.1  

>AF000193-3|AAB52890.1|  259|Caenorhabditis elegans Hypothetical
           protein T20B6.3 protein.
          Length = 259

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +1

Query: 250 GGGKVFGTLGESDQGLFGKGGYNREFFNDDRGKLTGQAYGTRVLGXGGDSTSYGG 414
           GGG   G  G    G +G GG+         G + G  YG   +G GG    YGG
Sbjct: 167 GGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGG----YGG 217


>AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.19 protein.
          Length = 643

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 250 GGGKVFGTLGESDQGLFGKGGY-NREFFNDDRGKLTGQAYGTRVLGXGGD 396
           GGG      G+     F +GGY NR+  +D+RG  +G++Y       GGD
Sbjct: 55  GGGYNRQDRGDGGSSNFSRGGYNNRDEGSDNRG--SGRSYNNDRRDNGGD 102


>Z78413-7|CAB01657.1|  352|Caenorhabditis elegans Hypothetical
           protein T01C3.7 protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
 Frame = +1

Query: 250 GGGKVFGTLGESDQGLFG---KGGYNREFFNDDRGKLTGQAYGTRVLGXGGDSTSYGG 414
           GGG+  G  G  D+G FG   +GG+       DRG   G   G    G GG  +  GG
Sbjct: 32  GGGR--GGYGGGDRGSFGGGDRGGFRGGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGG 87


>AC006809-3|AAY86286.1|  558|Caenorhabditis elegans Hypothetical
           protein Y5H2A.4 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 48  SCLEQRNCHNSKCIPRCCYPAA 113
           SC + + CH  +CIP+C  PAA
Sbjct: 435 SCQQTQQCHQ-QCIPQCQQPAA 455


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,276,553
Number of Sequences: 27780
Number of extensions: 284127
Number of successful extensions: 626
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)