Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N22
         (976 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001866-1|AAN71636.1|  778|Drosophila melanogaster SD01955p pro...    31   2.4  
AE014297-6|AAF52171.2|  778|Drosophila melanogaster CG12582-PB, ...    31   2.4  
AE014297-5|AAF52172.2|  908|Drosophila melanogaster CG12582-PA, ...    31   2.4  

>BT001866-1|AAN71636.1|  778|Drosophila melanogaster SD01955p
           protein.
          Length = 778

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 358 PKXFSLTKXFPGPQGPEXQTXXPLQISLQIGF---SFATSPSPSGIYGLLVFLLREASSF 188
           P  F+L K + GP GPE ++      SL++GF        P+P G+    +F +     F
Sbjct: 186 PLHFTL-KTWLGPDGPEVRSKTKSHKSLRVGFRTLDLVKDPAPDGVGNTFLFRVNGVEMF 244


>AE014297-6|AAF52171.2|  778|Drosophila melanogaster CG12582-PB,
           isoform B protein.
          Length = 778

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 358 PKXFSLTKXFPGPQGPEXQTXXPLQISLQIGF---SFATSPSPSGIYGLLVFLLREASSF 188
           P  F+L K + GP GPE ++      SL++GF        P+P G+    +F +     F
Sbjct: 186 PLHFTL-KTWLGPDGPEVRSKTKSHKSLRVGFRTLDLVEDPAPDGVGNTFLFRVNGVEMF 244


>AE014297-5|AAF52172.2|  908|Drosophila melanogaster CG12582-PA,
           isoform A protein.
          Length = 908

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 358 PKXFSLTKXFPGPQGPEXQTXXPLQISLQIGF---SFATSPSPSGIYGLLVFLLREASSF 188
           P  F+L K + GP GPE ++      SL++GF        P+P G+    +F +     F
Sbjct: 316 PLHFTL-KTWLGPDGPEVRSKTKSHKSLRVGFRTLDLVEDPAPDGVGNTFLFRVNGVEMF 374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,088,613
Number of Sequences: 53049
Number of extensions: 360077
Number of successful extensions: 518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4894529517
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)