Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N21
         (865 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944           41   0.001
02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254     41   0.001
02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907     41   0.001
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.2  

>06_01_0572 - 4044610-4044658,4044754-4044857,4044942-4044944
          Length = 51

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +1

Query: 199 ENTIRYNAKRRHWRXTKL 252
           +NTIRYNAKRRHWR TKL
Sbjct: 32  DNTIRYNAKRRHWRRTKL 49


>02_05_1078 + 33946902-33946904,33947006-33947109,33947206-33947254
          Length = 51

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +1

Query: 199 ENTIRYNAKRRHWRXTKL 252
           +NTIRYNAKRRHWR TKL
Sbjct: 32  DNTIRYNAKRRHWRRTKL 49


>02_05_1076 + 33932543-33932545,33932643-33932746,33932859-33932907
          Length = 51

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +1

Query: 199 ENTIRYNAKRRHWRXTKL 252
           +NTIRYNAKRRHWR TKL
Sbjct: 32  DNTIRYNAKRRHWRRTKL 49


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
 Frame = -1

Query: 865  GGGGXXXXPPPXGAFXXXXGPXXGXLGKNFF--XGXIPXXLGXXXXPPXXGGXKXPP 701
            G G     PPP G       P  G LG +       +P  +G    PP  GG   PP
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPP 1161


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,329,594
Number of Sequences: 37544
Number of extensions: 254901
Number of successful extensions: 275
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)