Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_N20
(1040 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 33 0.34
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 33 0.34
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 33 0.34
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.44
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.44
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.44
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.44
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.44
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.59
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.78
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 3.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 3.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.1
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 26 4.5
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 26 4.8
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 29 5.5
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 5.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 7.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 7.2
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 28 9.6
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.6
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 9.6
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 28 9.6
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 33.1 bits (72), Expect = 0.34
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
G PPPPP G G P PPP
Sbjct: 232 GAPPPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 33.1 bits (72), Expect = 0.34
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
G PPPPP G G P PPP
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.34
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
G PPPPP G G P PPP
Sbjct: 218 GAPPPPPLPPVGAGAPPPPPP 238
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -3
Query: 732 GXXXXGGXPPXXXXXXKXXXXXXXGXGPPPPPPXXXXGXGXXPXPPP 592
G GG PP + G PPPPP G G P PPP
Sbjct: 326 GPPGMGGMPPPPPPGMRYPG----GMPPPPPPRYPSAGPGMYPPPPP 368
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -3
Query: 732 GXXXXGGXPPXXXXXXKXXXXXXXGXGPPPPPPXXXXGXGXXPXPPP 592
G GG PP PP PP G G P PPP
Sbjct: 340 GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -3
Query: 651 PPPPPP--XXXXGXGXXPXPPP 592
PPPPPP G G P PPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPP 338
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Frame = -1
Query: 707 PPPPXXXXXKXXFXXXXXXPPPPPPXXX--VXXGXXPXPPXXG 585
PPPP PPPPPP G P PP G
Sbjct: 298 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 717 GGXPPXXXXXXKXXXXXXXGXGPPPPPPXXXXGXGXXPXPPP 592
GG PP PPPPPP G P PPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.44
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -1
Query: 734 GXXXXGGGXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G GG PPPP PPPPPP G P PP G
Sbjct: 750 GLPPISGGPPPPPPPPGG--------CPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -1
Query: 713 GXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G PPPP PPPP + G P PP G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
GPPPPP G P PPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPP 732
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
G PPPPP G P PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPP 731
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 649 PPPPPXXXXWXGGXPXXPPXXG 584
PPPPP GG P PP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG 734
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 717 GGXPPXXXXXXKXXXXXXXGXGPPPPPPXXXXGXGXXPXPPP 592
GG PP PPPPPP G P PPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
Score = 32.7 bits (71), Expect = 0.44
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -1
Query: 734 GXXXXGGGXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G GG PPPP PPPPPP G P PP G
Sbjct: 750 GLPPISGGPPPPPPPPGG--------CPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -1
Query: 713 GXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G PPPP PPPP + G P PP G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
GPPPPP G P PPP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPP 732
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
G PPPPP G P PPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPP 731
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 649 PPPPPXXXXWXGGXPXXPPXXG 584
PPPPP GG P PP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG 734
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.44
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -3
Query: 732 GXXXXGGXPPXXXXXXKXXXXXXXGXGPPPPPPXXXXGXGXXPXPPP 592
G GG PP + G PPPPP G G P PPP
Sbjct: 336 GPPGMGGMPPPPPPGMRYPG----GMPPPPPPRYPSAGPGMYPPPPP 378
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = -3
Query: 732 GXXXXGGXPPXXXXXXKXXXXXXXGXGPPPPPPXXXXGXGXXPXPPP 592
G GG PP PP PP G G P PPP
Sbjct: 350 GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -3
Query: 651 PPPPPP--XXXXGXGXXPXPPP 592
PPPPPP G G P PPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPP 348
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Frame = -1
Query: 707 PPPPXXXXXKXXFXXXXXXPPPPPPXXX--VXXGXXPXPPXXG 585
PPPP PPPPPP G P PP G
Sbjct: 308 PPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 717 GGXPPXXXXXXKXXXXXXXGXGPPPPPPXXXXGXGXXPXPPP 592
GG PP PPPPPP G P PPP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
Score = 32.7 bits (71), Expect = 0.44
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -1
Query: 734 GXXXXGGGXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G GG PPPP PPPPPP G P PP G
Sbjct: 333 GLPPISGGPPPPPPPPGG--------CPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -1
Query: 713 GXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G PPPP PPPP + G P PP G
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
GPPPPP G P PPP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPP 315
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
G PPPPP G P PPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPP 314
Score = 28.7 bits (61), Expect = 7.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 649 PPPPPXXXXWXGGXPXXPPXXG 584
PPPPP GG P PP G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGG 317
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.59
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = -1
Query: 716 GGXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPP 594
GG PPPP PPPPPP + G P PP
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGL--GVAPQPP 130
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.78
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 660 GXGPPPPPPXXXXGXGXXPXPPP 592
G PPPPPP G P PPP
Sbjct: 574 GAPPPPPPPPPMLGGPPPPPPPP 596
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 707 PPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
PPPP + PPPPPP + G P PP G
Sbjct: 561 PPPPPPPLPQNL----SGAPPPPPPPPPMLGGPPPPPPPPG 597
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -1
Query: 704 PPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPP 594
PPP PPPPPP G P PP
Sbjct: 520 PPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
Score = 23.8 bits (49), Expect(2) = 7.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 650 PPPPPPXXXVXXGXXP 603
PPPPPP + G P
Sbjct: 579 PPPPPPPSFMFNGKVP 594
Score = 23.0 bits (47), Expect(2) = 7.5
Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 5/33 (15%)
Frame = -1
Query: 716 GGXPPPPXXXXXKXX-----FXXXXXXPPPPPP 633
GG PPPP PPPPPP
Sbjct: 549 GGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPP 581
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 31.5 bits (68), Expect = 1.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 651 PPPPPPXXXXGXGXXPXPPP 592
PPPPPP G P PPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 31.5 bits (68), Expect = 1.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 651 PPPPPPXXXXGXGXXPXPPP 592
PPPPPP G P PPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPP 813
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.5 bits (68), Expect = 1.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 651 PPPPPPXXXXGXGXXPXPPP 592
PPPPPP G P PPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPPP 142
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 651 PPPPPPXXXXGXGXXPXPPP 592
PPPPPP G P PPP
Sbjct: 40 PPPPPPPCGGGYEAPPPPPP 59
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 651 PPPPPPXXXXGXGXXPXPPP 592
PPPPPP G P PPP
Sbjct: 39 PPPPPPPPCGGGYEAPPPPP 58
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = -1
Query: 707 PPPPXXXXXKXXFXXXXXXPPPPPP---XXXVXXGXXPXPP 594
PPPP PPPPPP V G P PP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 653
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -3
Query: 651 PPPPPP--XXXXGXGXXPXPPP 592
PPPPPP G G P PPP
Sbjct: 633 PPPPPPMGLPAVGAGAPPPPPP 654
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Frame = -1
Query: 707 PPPPXXXXXKXXFXXXXXXPPPPPP---XXXVXXGXXPXPP 594
PPPP PPPPPP V G P PP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPP 479
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Frame = -3
Query: 651 PPPPPP--XXXXGXGXXPXPPP 592
PPPPPP G G P PPP
Sbjct: 459 PPPPPPMGLPAVGAGAPPPPPP 480
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 713 GXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G PPPP PPPPPP G P P G
Sbjct: 278 GSPPPPPAGGSPPP-PRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 713 GXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G PPPP PPPPPP G P P G
Sbjct: 299 GSPPPPPAGGSPPP-PRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -1
Query: 713 GXPPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
G PPPP PPPPPP G P P G
Sbjct: 284 GSPPPPPAGGSPPP-PRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 25.8 bits (54), Expect(2) = 4.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
GPPPPPP PPP
Sbjct: 1011 GPPPPPPPPPADFFANIAPPP 1031
Score = 21.8 bits (44), Expect(2) = 4.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 660 GXGPPPPPP 634
G G PPPPP
Sbjct: 1008 GPGGPPPPP 1016
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 25.8 bits (54), Expect(2) = 4.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 654 GPPPPPPXXXXGXGXXPXPPP 592
GPPPPPP PPP
Sbjct: 250 GPPPPPPPPPADFFANIAPPP 270
Score = 21.8 bits (44), Expect(2) = 4.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 660 GXGPPPPPP 634
G G PPPPP
Sbjct: 247 GPGGPPPPP 255
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical protein
H05G16.1 protein.
Length = 1111
Score = 29.1 bits (62), Expect = 5.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 707 PPPPXXXXXKXXFXXXXXXPPPPPP 633
PPPP K PPPPPP
Sbjct: 1023 PPPPEEILNKAMISSSRPAPPPPPP 1047
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = -3
Query: 732 GXXXXGGXPPXXXXXXKXXXXXXXGXGPPPPPPXXXXGXGXXPXPPP 592
G GG PP + G GPPPPPP P PPP
Sbjct: 70 GMPFMGGPPPHHQYHLQYPPPH--GLGPPPPPPHYY----TQPPPPP 110
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 7.2
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 707 PPPPXXXXXKXXFXXXXXXPPPPPPXXXVXXGXXPXPPXXG 585
PPPP PPPPPP + P PP G
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLK--APPPPPILG 105
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 651 PPPPPPXXXXGXGXXPXPPP 592
PPPPPP P PPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPP 1358
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 596 GGXGXXPXPXXXXGGGGGG 652
GG G P P GGGGGG
Sbjct: 266 GGGGGYPQPPPQQGGGGGG 284
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 651 PPPPPPXXXXGXGXXPXPPP 592
PPPPPP P PPP
Sbjct: 158 PPPPPPVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 651 PPPPPPXXXXGXGXXPXPPP 592
PPPPPP P PPP
Sbjct: 158 PPPPPPVSVPSSKPTPPPPP 177
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 634 GGGGGGXXXXXXXXXXFXXXXGGGGXPPPXXXXPF 738
GGGGGG GGGG PP P+
Sbjct: 843 GGGGGGSYHQPYNQDQRRGGRGGGGGPPGYQRPPY 877
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,591,292
Number of Sequences: 27780
Number of extensions: 206199
Number of successful extensions: 2741
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2762030832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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