Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N19
         (1212 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0019 + 11931519-11932310                                         31   1.4  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   2.4  

>10_07_0019 + 11931519-11932310
          Length = 263

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 18/50 (36%), Positives = 18/50 (36%)
 Frame = -2

Query: 1208 EXRREXXXGXRCXXRXXWXXXXXXDXRGXWGXVRXAXDXXRGAPGXGXGG 1059
            E R       RC  R  W         G WG  R A D   G PG G GG
Sbjct: 29   EARPRATLPLRC--RRWWCRSEPTSRGGGWGGRRDAGDEEDGEPGAGDGG 76


>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 17/67 (25%), Positives = 22/67 (32%)
 Frame = +3

Query: 1002 PXXPXPSTSXSHXRPAXXPSXXPXSGCSATSVPRXPXXXPXXSXVXXXXXXPXXPPXAPX 1181
            P  P P ++ +  +P   P   P   C    VP  P   P    +      P  PP  P 
Sbjct: 571  PPPPLPQSNYASSQPPPPPPPPPLPNCL---VPSPPPPPPPPPILPNRSVPPPPPPPPPL 627

Query: 1182 PXXRFSP 1202
            P     P
Sbjct: 628  PNHSVLP 634


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,079,902
Number of Sequences: 37544
Number of extensions: 68918
Number of successful extensions: 98
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3713048988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)