Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N18
         (927 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0688 + 26762668-26762893,26763027-26763101,26763865-267640...    30   3.0  
01_03_0005 + 11568545-11569119,11569179-11569191                       30   3.0  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    30   3.0  

>03_05_0688 +
           26762668-26762893,26763027-26763101,26763865-26764032,
           26764983-26765114,26765538-26765677,26765840-26765908,
           26766325-26766435,26766854-26766973,26768223-26768324,
           26769608-26769778,26769865-26769944,26770119-26770182
          Length = 485

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 707 GGGXXNPPPGXXGGGGXGXGEKXTPXXG 624
           GGG  +P  G  GGGG G G + +   G
Sbjct: 25  GGGGVDPAGGGSGGGGPGMGRRGSDARG 52


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 16/38 (42%), Positives = 17/38 (44%)
 Frame = -2

Query: 707 GGGXXNPPPGXXGGGGXGXGEKXTPXXGXXXFFFXPPP 594
           GGG   PPP   GGGG G G       G   +   PPP
Sbjct: 108 GGGIYYPPP--TGGGGGGGGGWQQGGGGGGAYPTPPPP 143


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 707 GGGXXNPPPGXXGGGGXGXG 648
           GGG   PPP   GGGG G G
Sbjct: 390 GGGPGAPPPYHGGGGGGGGG 409


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,972,630
Number of Sequences: 37544
Number of extensions: 143146
Number of successful extensions: 1242
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)