Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N17
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665...    31   1.2  
12_01_0396 - 3128047-3128273,3128350-3128632,3128717-3128874,312...    30   2.9  
01_05_0560 - 23288078-23288370,23288448-23288733                       29   3.8  
10_06_0020 - 9693126-9693437,9694940-9695368                           29   5.0  
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753...    29   5.0  
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496...    29   6.6  
01_01_0661 - 5036592-5037428,5037529-5037957,5038067-5038261,503...    29   6.6  
05_01_0570 + 5061600-5062142,5062790-5062972                           28   8.7  

>09_04_0727 + 19765175-19765384,19765523-19765595,19766476-19766570,
            19766666-19768450,19768533-19768721,19768816-19768958,
            19769075-19769320,19769975-19770059,19770117-19770191,
            19770304-19770369,19770466-19770712,19770824-19771242
          Length = 1210

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 507  LPPFNPKPIYIDMGXRYRRHASDD-PEELRXYNEXFL-IPXGY 629
            LP  NP+P+  D G      ASDD PE+L      F+ +  GY
Sbjct: 1122 LPELNPEPMVTDNGENAAMPASDDIPEQLEVVKRRFMELTTGY 1164


>12_01_0396 -
           3128047-3128273,3128350-3128632,3128717-3128874,
           3129097-3129314,3129682-3129912,3130630-3130691
          Length = 392

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 188 WPEGRLDEPLARSLSKEQHPRTELEYLKTLYH 93
           W + R+D+ +  S  K +   TE++ LKTL H
Sbjct: 35  WSQSRIDDSVMGSSKKMKQLNTEIQLLKTLKH 66


>01_05_0560 - 23288078-23288370,23288448-23288733
          Length = 192

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 271 LGAPSTADHPILPSKIDDVQLDPNRRYVRS 360
           L  P  A H +L S  DDV  DP+ RYV S
Sbjct: 120 LPRPLRAGHYVLSSPPDDVDHDPDHRYVFS 149


>10_06_0020 - 9693126-9693437,9694940-9695368
          Length = 246

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -3

Query: 309 RKNRMVCSTWRTEEHC---HLDTAIAVPGQLVALYVLSGAVLA 190
           R+ R  CS W +++ C   HL+TA AV   ++   VL+  VLA
Sbjct: 113 RRRRRSCSWWSSQQWCSRRHLETAAAV---VLLTVVLAAVVLA 152


>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
            18577344-18577458,18578179-18578333,18578673-18580621,
            18580691-18581372,18581550-18581621,18582558-18583199,
            18583301-18583402,18585011-18585100
          Length = 2192

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 280  PSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHT 411
            P T  H I  S +DD+     R  VR   +P+N ++ +  S +T
Sbjct: 2067 PETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSGSGNT 2110


>11_01_0620 -
           4964263-4965052,4965578-4965663,4966332-4966413,
           4967052-4967156,4967600-4967772,4967988-4968101,
           4973939-4974037,4974320-4974398,4975424-4975492,
           4975955-4976061
          Length = 567

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 255 QGDNVPRCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK*R 383
           +G +VP  ++  +P DS F++    A++KP   S+   SR+ R
Sbjct: 525 RGSSVPTASRQTKPEDSLFKDLVDFAKNKPSSPSKPANSRRTR 567


>01_01_0661 -
           5036592-5037428,5037529-5037957,5038067-5038261,
           5038919-5038942,5039436-5039780
          Length = 609

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +1

Query: 217 QRDKLARNRYGCIKVTMFLGAPSTADHPILPSKID-DVQLDPNRRYVRSVTNPENNEASI 393
           QRD  A     C  +   L A   A+HP +P++ + D  +       R + + E + A+ 
Sbjct: 364 QRDDSAGGESACTALVAVLAAALHANHPTMPTRPELDALIRDGSSEWRRLCDDEAHMAAF 423

Query: 394 EHSHHTVDT 420
            + H  ++T
Sbjct: 424 PNRHFDLET 432


>05_01_0570 + 5061600-5062142,5062790-5062972
          Length = 241

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 331 AARRRFSKEESDGLQYLAHRGTLSP*YSHS--GSWPA 227
           +ARRR  KEE+ G+   A R T +P  + +   SWPA
Sbjct: 170 SARRRPRKEETTGINGTARRPTSTPCPTEARLSSWPA 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,677,027
Number of Sequences: 37544
Number of extensions: 483338
Number of successful extensions: 1161
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)