Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N17
         (893 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC060865-1|AAH60865.1|  599|Homo sapiens zinc finger protein 530...    30   9.9  
BC009930-1|AAH09930.1|  250|Homo sapiens FRAG1 protein protein.        30   9.9  
AY373030-1|AAQ75733.1|  254|Homo sapiens FGF receptor activating...    30   9.9  
AF159621-1|AAF19156.1|  315|Homo sapiens FGF receptor activating...    30   9.9  
AF159615-1|AAF12755.1|  315|Homo sapiens FGF receptor activating...    30   9.9  
AC003682-5|AAC24609.1|  557|Homo sapiens R28830_2 protein.             30   9.9  
AB040941-1|BAA96032.1|  573|Homo sapiens KIAA1508 protein protein.     30   9.9  

>BC060865-1|AAH60865.1|  599|Homo sapiens zinc finger protein 530
           protein.
          Length = 599

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 276 CAKYCRPSDSSFENRRRAARSKPKVCSQCHQS 371
           C K    S   F +RR   ++KP  CS+C +S
Sbjct: 440 CGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 471


>BC009930-1|AAH09930.1|  250|Homo sapiens FRAG1 protein protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -1

Query: 350 YLRFGSSCTSSIFEGRIGWSAVLG---APRNIVTLIQP*RFLASLSRCTCYRALC 195
           YL   SS        R  W   +G   APR +V       +L+  S C+CYR LC
Sbjct: 59  YLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLC 113


>AY373030-1|AAQ75733.1|  254|Homo sapiens FGF receptor activating
           protein 1 isoform protein.
          Length = 254

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -1

Query: 350 YLRFGSSCTSSIFEGRIGWSAVLG---APRNIVTLIQP*RFLASLSRCTCYRALC 195
           YL   SS        R  W   +G   APR +V       +L+  S C+CYR LC
Sbjct: 59  YLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLC 113


>AF159621-1|AAF19156.1|  315|Homo sapiens FGF receptor activating
           protein 1 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -1

Query: 350 YLRFGSSCTSSIFEGRIGWSAVLG---APRNIVTLIQP*RFLASLSRCTCYRALC 195
           YL   SS        R  W   +G   APR +V       +L+  S C+CYR LC
Sbjct: 120 YLPSVSSAIGGEVPHRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLC 174


>AF159615-1|AAF12755.1|  315|Homo sapiens FGF receptor activating
           protein 1 protein.
          Length = 315

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
 Frame = -1

Query: 350 YLRFGSSCTSSIFEGRIGWSAVLG---APRNIVTLIQP*RFLASLSRCTCYRALC 195
           YL   SS        R  W   +G   APR +V       +L+  S C+CYR LC
Sbjct: 120 YLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLVAFAYWNHYLSCTSPCSCYRPLC 174


>AC003682-5|AAC24609.1|  557|Homo sapiens R28830_2 protein.
          Length = 557

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 276 CAKYCRPSDSSFENRRRAARSKPKVCSQCHQS 371
           C K    S   F +RR   ++KP  CS+C +S
Sbjct: 398 CGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 429


>AB040941-1|BAA96032.1|  573|Homo sapiens KIAA1508 protein protein.
          Length = 573

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 276 CAKYCRPSDSSFENRRRAARSKPKVCSQCHQS 371
           C K    S   F +RR   ++KP  CS+C +S
Sbjct: 414 CGKVFSQSSGLFRHRRAHTKTKPYECSECEKS 445


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,182,272
Number of Sequences: 237096
Number of extensions: 2705441
Number of successful extensions: 6622
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6622
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)