Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N14
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0050 - 444267-444914                                             32   0.71 
11_01_0710 - 5830475-5830595,5831498-5834124                           29   3.8  
02_01_0033 + 202703-202705,203397-203458,203566-203665,203875-20...    29   3.8  
08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054     29   5.0  
07_01_1106 - 10187609-10190041,10190292-10191932                       29   6.6  
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763...    29   6.6  
04_01_0073 + 786594-786786,787571-787603,787814-788005,788176-78...    29   6.6  
01_01_0233 - 1957104-1958041,1958213-1958467,1959420-1960136,196...    28   8.7  

>06_01_0050 - 444267-444914
          Length = 215

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 679 ATALAFIKELEEKHEDHRTEQEKLDDD 759
           A + A I ELE+K +  R EQ++LDD+
Sbjct: 43  ANSAAIISELEKKRQQKREEQQRLDDE 69


>11_01_0710 - 5830475-5830595,5831498-5834124
          Length = 915

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +2

Query: 560 IRECLGTKAVPDHVKNPEKWKYYSLSGCYXLSKC 661
           I EC G K++P+ ++     ++  +SGC  L +C
Sbjct: 843 IWECRGIKSLPESIEQLTMLEHLEISGCPELKQC 876


>02_01_0033 +
           202703-202705,203397-203458,203566-203665,203875-203916,
           204264-204305,204437-204589,206559-207221
          Length = 354

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 679 ATALAFIKELEEKHEDHRTEQEKLDDD 759
           A + A I ELE+K +  R EQ++LD++
Sbjct: 174 ANSAAIISELEKKKQKKREEQQRLDEE 200


>08_01_0994 + 10071081-10072163,10072704-10074530,10074977-10075054
          Length = 995

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +2

Query: 557 NIRECLGTKAVPDHVKNPEKWKYYSLSGCYXLSKCQM 667
           N+  C     +P H+ +  + +Y +LSGC  L K  M
Sbjct: 570 NLSNCFLLSQLPSHIGSLTELQYLNLSGCQGLVKLPM 606


>07_01_1106 - 10187609-10190041,10190292-10191932
          Length = 1357

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2

Query: 557 NIRECLGTKAVPDHVKNPEKWKYYSLSGCY 646
           N+ +C+    +P + ++ +K +Y + +GCY
Sbjct: 460 NLSDCIRLMGIPQNFEDLQKLEYLNFAGCY 489


>06_01_0983 -
           7630651-7630683,7630717-7630942,7630993-7631234,
           7631502-7631591,7631680-7631845,7632225-7633191,
           7633402-7633591,7633908-7634048,7634416-7634736
          Length = 791

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 446 VTTTQDYGTIDRKSYRKLKHEMKQFRGKQSIFKRPEANI 562
           + T +DYG+   + Y K++ E  +    +S  K P A +
Sbjct: 432 IITNEDYGSFTTEDYEKVRREADEAIASKSATKSPVAEV 470


>04_01_0073 +
           786594-786786,787571-787603,787814-788005,788176-788903
          Length = 381

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 637 GMLQXEQMSDATNTATALAFIKELEEKHEDHRTEQEKLDDDIFXK 771
           G+    +M+ A  TA ALA++  +E  H D +T+   LD++   K
Sbjct: 218 GLTWPVRMTIAIETAEALAYLHAVEIIHRDVKTKNILLDNNFHVK 262


>01_01_0233 -
           1957104-1958041,1958213-1958467,1959420-1960136,
           1960728-1961403
          Length = 861

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 637 GMLQXEQMSDATNTATALAFIKELEEKHEDHRTEQEKLDDDIFXK 771
           G+    +M+ A  TA ALA++  +E  H D +T    LD++   K
Sbjct: 628 GLTWPVRMTIAIETAEALAYLHAVEIIHRDVKTNNILLDNNFHVK 672


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,312,615
Number of Sequences: 37544
Number of extensions: 265462
Number of successful extensions: 614
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)