Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N10
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0545 + 16996340-16996418,16998039-16998142,16999796-169999...    44   1e-04
09_06_0327 + 22359524-22359602,22359732-22359835,22362073-223622...    36   0.054
08_02_0085 + 12108474-12108552,12108656-12108759,12109726-121099...    35   0.071
08_02_1566 + 27909297-27909390,27909542-27909645,27912899-279130...    35   0.094

>04_03_0545 +
           16996340-16996418,16998039-16998142,16999796-16999995,
           17000186-17000228
          Length = 141

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
 Frame = +1

Query: 280 DVKRIYILMRSKKGISMPERLQSQ-FNEPVYDNLR-----SXQPDFARKVIPVEGDISEL 441
           DV+++Y+L+R+    +  ERL ++   + ++D LR     S       KV P+ GDI+  
Sbjct: 38  DVRKLYLLVRAPDAAAAKERLLTEVVGKGLFDVLREQHGASFHSFIKEKVCPLPGDITHQ 97

Query: 442 GVGLNNEDRXKLAHXVNVIXHVAXTT 519
             GL N +  +L+  V++I + A TT
Sbjct: 98  NFGLGNSEILRLSQDVDIIVNGAATT 123


>09_06_0327 +
           22359524-22359602,22359732-22359835,22362073-22362272,
           22362359-22362459,22362551-22363005,22363079-22363645
          Length = 501

 Score = 35.5 bits (78), Expect = 0.054
 Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
 Frame = +1

Query: 280 DVKRIYILMRSKKGISMPERLQSQ-FNEPVYDNLRSX-----QPDFARKVIPVEGDISEL 441
           DV++IY+ +R+    +  +R+Q++   + ++  L+       Q     KV+P+  D+   
Sbjct: 38  DVRKIYLPVRAVDAATAKQRMQTEVIGKELFGLLKEQHGKGFQSFIDEKVVPLAADMMHQ 97

Query: 442 GVGLNNEDRXKLAHXVNVIXHVAXTT 519
            +GL      +LA  +N+I + A TT
Sbjct: 98  NLGLEESTLQELAKDLNIIVNGAATT 123


>08_02_0085 +
           12108474-12108552,12108656-12108759,12109726-12109925,
           12110003-12110103,12110184-12110379,12110584-12110745,
           12110856-12110937,12111741-12112004,12113047-12113174,
           12113795-12113957
          Length = 492

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
 Frame = +1

Query: 280 DVKRIYILMRSKKGISMPERLQSQF-NEPVYDNLRSXQPD-----FARKVIPVEGDISEL 441
           DVK++Y+L+R+    S   R+Q +   + ++  L+    D        KV  + GDI   
Sbjct: 38  DVKKLYLLVRANDVESATRRVQDEVTGKEIFQVLKEKHGDGFESFVEEKVCTLAGDIIYE 97

Query: 442 GVGLNNEDRXKLAHXVNVIXHVAXTT 519
            +GL++    +L++ +++I + A TT
Sbjct: 98  NLGLDSAKLTELSNEIDIIVNGAATT 123


>08_02_1566 +
           27909297-27909390,27909542-27909645,27912899-27913098,
           27913214-27913314,27913427-27914130,27914671-27914834,
           27914941-27915100
          Length = 508

 Score = 34.7 bits (76), Expect = 0.094
 Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
 Frame = +1

Query: 280 DVKRIYILMRSKKGISMPERLQSQFNE-PVYDNLRSXQ-PDFAR----KVIPVEGDISEL 441
           DVK+IY+L+R+    S  +R+QS+  E  ++  ++      F+R    KV+ + GDI   
Sbjct: 43  DVKKIYLLVRAIDQASANQRVQSEVTETELFSVVKEKHGKGFSRFIEEKVVALAGDIIYD 102

Query: 442 GVGLNNEDRXKLAHXVNVIXHVAXTT 519
            +GL+      LA  ++VI + A TT
Sbjct: 103 DLGLDPPLLQHLADNLDVIVNGAATT 128


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,921,126
Number of Sequences: 37544
Number of extensions: 217088
Number of successful extensions: 449
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)