Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N08
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008           31   0.90 
12_01_0981 + 9931542-9931606,9931779-9933105                           31   1.6  
03_06_0471 + 34169562-34169892,34170121-34170347                       29   4.8  
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    29   6.4  

>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
          Length = 580

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +1

Query: 139 PTLKPPLGSWKTPTQETATKPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQG 309
           P+   P  + + P +  +  P  + P  V PP  Y P  +G  P     N + Y + P G
Sbjct: 376 PSTPLPPAAPQQPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVG 434

Query: 310 RPYFKPTPFPGARG 351
           RP   P P  GA G
Sbjct: 435 RPNSGPPPSYGAGG 448


>12_01_0981 + 9931542-9931606,9931779-9933105
          Length = 463

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/63 (33%), Positives = 27/63 (42%)
 Frame = +1

Query: 151 PPLGSWKTPTQETATKPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPT 330
           PP      PT E  T    N   I  PP  + P    Y P++   ++  +PQ  PY   T
Sbjct: 48  PPPPPNHIPTTERNTSVFFNTSTIPPPPPPHFPQPPQYTPLNQ--FFPYQPQ-YPYQPHT 104

Query: 331 PFP 339
           PFP
Sbjct: 105 PFP 107


>03_06_0471 + 34169562-34169892,34170121-34170347
          Length = 185

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = +1

Query: 199 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPG 342
           P    P    PP  Y P+  GY P   GAY       +P + P  +PG
Sbjct: 58  PAGGYPGAQYPPSGYPPSQGGYPP---GAYPPSGYPQQPGYPPAGYPG 102


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = +1

Query: 175 PTQETATKPIDNRPYIVNP---PKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKP 327
           P +ET       +PY   P   P    P G  Y P   G  Y   P+G+P + P
Sbjct: 254 PQRETYPPQPQVQPYPPKPQGQPYPPQPQGQPYPPQPYGQTYPPPPKGQPTYPP 307


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,588,948
Number of Sequences: 37544
Number of extensions: 310529
Number of successful extensions: 721
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)