Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N08
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49125-6|CAA88937.2|  776|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AC024211-4|AAP82631.1|  487|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z49125-6|CAA88937.2|  776|Caenorhabditis elegans Hypothetical
           protein C47G2.5a protein.
          Length = 776

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +1

Query: 130 WLWPTLKPPLGSWKTPTQETATKPIDN 210
           W+WPT+ PPLG  +  TQ T  +P +N
Sbjct: 658 WVWPTV-PPLGETEVVTQ-TGHRPENN 682


>U21319-7|AAL16307.1|  469|Caenorhabditis elegans Hypothetical
           protein C30G12.1 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 239 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 337
           TTT M T T  ST +  T T P+     ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326


>AC024211-4|AAP82631.1|  487|Caenorhabditis elegans Hypothetical
           protein Y76B12C.6 protein.
          Length = 487

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 161 PNGGLSVGQSQQSEDEKHEELHFEMSTSEHRRK 63
           P GG+   Q QQ    K  + H +  + E+RRK
Sbjct: 441 PPGGIHGAQQQQQAVRKRPDSHQQQQSEENRRK 473


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,883,935
Number of Sequences: 27780
Number of extensions: 258445
Number of successful extensions: 779
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)