Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_N04
(846 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0180 + 2034021-2034023,2034741-2035088 35 0.071
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 33 0.38
12_02_0797 - 23230441-23230757,23230922-23231069,23231352-232325... 31 0.87
07_03_1615 - 28157237-28157472,28157649-28157728,28157853-281580... 31 0.87
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 31 1.2
03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559 30 2.0
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592 30 2.7
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 29 3.5
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 29 4.7
02_05_1268 - 35345283-35345462,35345577-35345636,35345719-353460... 29 6.2
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 29 6.2
02_04_0315 - 21969416-21970756 29 6.2
01_05_0249 - 19903154-19903454,19904114-19904168,19904707-199047... 29 6.2
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 29 6.2
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 35.1 bits (77), Expect = 0.071
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Frame = +2
Query: 275 HRTSARAWK-DGSESVLQQLNAFA-----KSLQGALGDANGKAKE------ALEQSRQNI 418
HR + R + D VL++ NA A K L G + N KE ALE+ QN+
Sbjct: 2 HRATRRGYTGDPPTKVLERENADAHKDQVKGLNGRISKLNDTIKELNDTIEALERQVQNL 61
Query: 419 ERTAEELRKAHPDVEKNATALREK---LQAAVQN 511
R EE +K H +++K L K L AA +N
Sbjct: 62 TRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95
>02_03_0273 + 17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 32.7 bits (71), Expect = 0.38
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Frame = +2
Query: 242 NSLTRSPS-QRTHRTSARA-WKDGSESVLQQLNAFAKSLQGA------LGDAN---GKAK 388
N+L R S R R R W D ++ + QQL+ A+++Q A L DA A+
Sbjct: 906 NALARQVSILRAEREKERRFWMDENKGLQQQLSDTAEAVQAAGELLVRLNDAEEAASLAQ 965
Query: 389 EALEQSRQNIERTAEELRKAHPDVEKNATALREKL-QAAVQNTVAGIPEVSEEG 547
+ E + Q + + E+ D ++ L ++L ++ + + V PE SE G
Sbjct: 966 KRAELAEQEMNKAFAEIDNLKRDHDQEVLVLNQRLAESKLPSNVVQSPEPSETG 1019
>12_02_0797 -
23230441-23230757,23230922-23231069,23231352-23232562,
23232639-23232894,23234073-23234309
Length = 722
Score = 31.5 bits (68), Expect = 0.87
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Frame = +2
Query: 254 RSPSQRTHRTSARAWKDGSES----VLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIE 421
+ PS+R+++ + + GS+ VL+ + + SLQ GKA EA +Q R ++
Sbjct: 121 KPPSKRSNKLRSDSSNSGSQHAASLVLEAIYLKSMSLQKL-----GKAVEAAQQCRSVLD 175
Query: 422 RTAEELRKAHPDVEKNATALREKLQAAVQNTVAGIPEV-SEEGVLERA 562
++ PDV + +KLQ V +V +PE+ + G + A
Sbjct: 176 AVESIFQRGIPDV-----MVEQKLQETVSKSVELLPELWKQAGAYQEA 218
>07_03_1615 -
28157237-28157472,28157649-28157728,28157853-28158009,
28158379-28158565,28158646-28158772,28159218-28159805,
28159898-28160443,28161579-28161620,28162081-28162145,
28162273-28162377,28162682-28162741,28163149-28163237,
28163611-28163732,28163862-28163968,28164041-28164111,
28164377-28164470,28165010-28165247,28166112-28166347
Length = 1049
Score = 31.5 bits (68), Expect = 0.87
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 519 QESQKLAKKVSSNVQETNEKLAPK---IKAAYDDFAKNTQEVIXKIQEAANAKQ*ASI 683
QES++ +K++ Q+ E+L + I+ A+DD KN++ ++ + QE AKQ ASI
Sbjct: 785 QESRETIQKLAQFGQQQQEELLSRQEQIRHAHDDLMKNSESIL-EAQEEFRAKQ-ASI 840
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 359 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 502
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEA 562
>03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559
Length = 789
Score = 30.3 bits (65), Expect = 2.0
Identities = 26/92 (28%), Positives = 40/92 (43%)
Frame = +2
Query: 293 AWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNA 472
+W D ++L+ + A S + A +AKEA +++ I A E + H V
Sbjct: 525 SW-DNLAALLRGVRRLATSGRAA-PPLEARAKEATAMAKKWIAMVAGEAEREHQRVAWAR 582
Query: 473 TALREKLQAAVQNTVAGIPEVSEEGVLERAGD 568
+A LQ +AG EV E V + GD
Sbjct: 583 SATWALLQFVAAYAIAGNLEVKEMMVFKTVGD 614
>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
Length = 853
Score = 29.9 bits (64), Expect = 2.7
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Frame = +2
Query: 341 AKSLQGALGDANGK---AKEALEQSRQNIERTAEELRKAHPDVEKNATALRE---KLQAA 502
A+ G +A GK A+EA E++ + + A ELRK + + ATA RE +L A
Sbjct: 151 AEQEAGRREEAEGKLRAAEEAAERAGKEAQEHAAELRKHRAALAELATARRELEAELARA 210
Query: 503 VQNTVAGIPEVSEEGVLERAGD**ETGAQ---DQGRLRR 610
+ A E+ E LER + T A+ + RLRR
Sbjct: 211 ARRGDAAEAELGE--ALERRDEAASTAAELSAECARLRR 247
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 356 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 496
G GD G+ + A+ +R E A LR+A ++ A ALR +++
Sbjct: 44 GEKGDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>05_07_0116 - 27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 29.1 bits (62), Expect = 4.7
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 314 SVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL 493
S +Q L + ++ + A +AN +A EAL Q + + L++ V N TAL KL
Sbjct: 889 STVQVLESLLETEREACAEANRRA-EALSLQLQATQSKLDMLQQELTSVRFNETALDSKL 947
Query: 494 QAAVQNTVAG 523
+A+ + G
Sbjct: 948 KASHARRLRG 957
>02_05_1268 -
35345283-35345462,35345577-35345636,35345719-35346042,
35346266-35346349,35346784-35346872,35346959-35347073,
35347534-35347660,35347743-35347882,35348010-35348071,
35348769-35348838,35348947-35349066,35349155-35349232,
35349738-35349968,35350110-35350220
Length = 596
Score = 28.7 bits (61), Expect = 6.2
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = +2
Query: 311 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 490
+SV QL A Q L A + LE S ++E E LR+ VE+ T + +
Sbjct: 520 KSVQHQLAAEGSRCQ-KLESQIAAAHKRLE-STDSLENELEVLRQQISQVEQTMTTAQRQ 577
Query: 491 LQAAVQNTVAGIPEVSEE 544
V VAG E+S++
Sbjct: 578 KSGGVWKWVAGSAEISDD 595
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 502
DA G+ EA+E + E+L A+PDV+ L E L+ A
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEA 681
>02_04_0315 - 21969416-21970756
Length = 446
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 290 RAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKN 469
RA +D + + Q+ N L + D NG + ALE++ + + E L A + K
Sbjct: 221 RAAEDEAHAAGQE-NVELAELHRVVDDENGSLRRALERAVEEVNAANESLELATGENSKL 279
Query: 470 ATALREKLQA 499
A+ EK A
Sbjct: 280 QDAVAEKESA 289
>01_05_0249 -
19903154-19903454,19904114-19904168,19904707-19904791,
19905140-19905511
Length = 270
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +2
Query: 338 FAKSLQGALG--DANGKAKEALEQSRQNIERTAEELRKAHPDV 460
F KSL G + D +GKAK+ + + + + +EE++ + DV
Sbjct: 184 FEKSLVGQINIEDMSGKAKDVINEEGSSEDGNSEEMKDSDDDV 226
>01_01_0832 -
6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/78 (21%), Positives = 37/78 (47%)
Frame = +2
Query: 245 SLTRSPSQRTHRTSARAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIER 424
SL P+++ A ++G + + + A QGA A G + A+ + +
Sbjct: 64 SLPLPPAKKGRPAKKAAAREGGDGEVYDVEVRAVEQQGATAAAFGAVETAVWPGDERPAQ 123
Query: 425 TAEELRKAHPDVEKNATA 478
T EEL +A ++ +++++
Sbjct: 124 TEEELYRACRNIRRSSSS 141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,174,947
Number of Sequences: 37544
Number of extensions: 258138
Number of successful extensions: 1162
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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