Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_N04
(846 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 35 0.084
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 35 0.084
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 35 0.084
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.084
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 35 0.084
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 32 0.59
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 32 0.59
Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical pr... 31 1.0
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 29 5.5
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 29 5.5
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 29 5.5
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 5.5
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 29 5.5
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 29 5.5
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 29 5.5
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 29 5.5
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 29 5.5
AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical ... 29 5.5
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 29 5.5
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 29 5.5
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 28 7.3
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 7.3
AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical ... 28 7.3
Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 28 9.6
AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory car... 28 9.6
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 28 9.6
AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synapt... 28 9.6
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 34.7 bits (76), Expect = 0.084
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 284 SARAWKDGSESVLQQLNAFAKSLQGALGDA-NGKAKEALEQSRQNIERTAEELRKAHPDV 460
+A+A D + L AFA+S+Q A + KE ++ + + + +E K +
Sbjct: 2494 NAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQL 2553
Query: 461 EKNATALREKLQAAVQNTVAGIPEVSE 541
E+ T L EKL+ + AGIP+ S+
Sbjct: 2554 EQ-LTELSEKLRKRKEAVKAGIPKYSK 2579
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.084
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 284 SARAWKDGSESVLQQLNAFAKSLQGALGDA-NGKAKEALEQSRQNIERTAEELRKAHPDV 460
+A+A D + L AFA+S+Q A + KE ++ + + + +E K +
Sbjct: 2494 NAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQL 2553
Query: 461 EKNATALREKLQAAVQNTVAGIPEVSE 541
E+ T L EKL+ + AGIP+ S+
Sbjct: 2554 EQ-LTELSEKLRKRKEAVKAGIPKYSK 2579
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 34.7 bits (76), Expect = 0.084
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 284 SARAWKDGSESVLQQLNAFAKSLQGALGDA-NGKAKEALEQSRQNIERTAEELRKAHPDV 460
+A+A D + L AFA+S+Q A + KE ++ + + + +E K +
Sbjct: 308 NAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQL 367
Query: 461 EKNATALREKLQAAVQNTVAGIPEVSE 541
E+ T L EKL+ + AGIP+ S+
Sbjct: 368 EQ-LTELSEKLRKRKEAVKAGIPKYSK 393
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.084
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 284 SARAWKDGSESVLQQLNAFAKSLQGALGDA-NGKAKEALEQSRQNIERTAEELRKAHPDV 460
+A+A D + L AFA+S+Q A + KE ++ + + + +E K +
Sbjct: 2494 NAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQL 2553
Query: 461 EKNATALREKLQAAVQNTVAGIPEVSE 541
E+ T L EKL+ + AGIP+ S+
Sbjct: 2554 EQ-LTELSEKLRKRKEAVKAGIPKYSK 2579
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 34.7 bits (76), Expect = 0.084
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 284 SARAWKDGSESVLQQLNAFAKSLQGALGDA-NGKAKEALEQSRQNIERTAEELRKAHPDV 460
+A+A D + L AFA+S+Q A + KE ++ + + + +E K +
Sbjct: 2494 NAKAQIDNAYEALSAEPAFAESVQNARDKPFPDETKEKIDALSKTVSQDLKETEKLKKQL 2553
Query: 461 EKNATALREKLQAAVQNTVAGIPEVSE 541
E+ T L EKL+ + AGIP+ S+
Sbjct: 2554 EQ-LTELSEKLRKRKEAVKAGIPKYSK 2579
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +2
Query: 344 KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQ 508
K L+G +G A E +Q N+ + ++ K H DV+ ++ALR L A Q
Sbjct: 19 KLLEG-IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQ 72
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 31.9 bits (69), Expect = 0.59
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVAGIPEVS 538
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + A + E++
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 539 EEGVLERAGD**ETGAQDQGRL 604
E L+ A + + + D RL
Sbjct: 1759 NE--LKNAVEQGQKASADAARL 1778
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 31.9 bits (69), Expect = 0.59
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +2
Query: 368 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL---REKLQAAVQNTVAGIPEVS 538
D + EA E++R+N E ELR+ + D+ + +AL R KL+ + A + E++
Sbjct: 1699 DELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIA 1758
Query: 539 EEGVLERAGD**ETGAQDQGRL 604
E L+ A + + + D RL
Sbjct: 1759 NE--LKNAVEQGQKASADAARL 1778
>Z81478-2|CAB03933.1| 195|Caenorhabditis elegans Hypothetical
protein C31G12.2 protein.
Length = 195
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -1
Query: 552 RTPSSLTSGIPATVFCTAACSFSRRAVAFFSTSGWALRS 436
RT + LTSG+ AT CTA SF + T GW RS
Sbjct: 117 RTSACLTSGLTAT--CTALTSFEWTDGSTTGTDGWIWRS 153
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
R07G3.3c protein.
Length = 1316
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/118 (20%), Positives = 46/118 (38%)
Frame = +2
Query: 194 KDIEHHTKXVP*DFXNNSLTRSPSQRTHRTSARAWKDGSESVLQQLNAFAKSLQGALGDA 373
K E+ K SL+ + + + + DGS S ++ L + + ++ + +A
Sbjct: 1097 KQAEYDEKLAQLSLQYESLSANLTNQNTTMEVKVNTDGSSSTVENLQSLLQFVRQSKDEA 1156
Query: 374 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVAGIPEVSEEG 547
+A A + R+ TAE R + + K EK+ + E +EG
Sbjct: 1157 TSRAMTAEVEMRRLRAETAEYERGRNELLRKIRDLETEKIATTAALVEKAVEEAEDEG 1214
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 64 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 222
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 64 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 222
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 64 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 222
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 64 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 222
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 64 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 222
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 64 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 222
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 28.7 bits (61), Expect = 5.5
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Frame = +2
Query: 251 TRSPSQRTHRTSARAWKDG--SESVLQQLNAFAKSLQGA---LGDANGKAKEALEQSRQN 415
TR+ + T R + + G +E+V ++ A A+ L+ LG+ GK+ L++ R+
Sbjct: 1484 TRAAATETFRLRNQLEESGEQTEAVKRENKALAQELKDIADQLGEG-GKSVHDLQKMRRR 1542
Query: 416 IERTAEELRKAHPDVEKNATALREKLQAAVQNTVAGIPEVSEEGVLER 559
+E EEL++A + E A K+ A Q V+ I E+ + E+
Sbjct: 1543 LEIEKEELQQALDEAECALEAEEAKVMRA-QIEVSQIRSEIEKRLQEK 1589
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 311 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 490
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 491 LQAAVQNTVAGIPEVSEE 544
L A ++ A ++ E+
Sbjct: 57 LDKAQEDLSAATSKLEEK 74
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 311 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 490
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 491 LQAAVQNTVAGIPEVSEE 544
L A ++ A ++ E+
Sbjct: 57 LDKAQEDLSAATSKLEEK 74
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 311 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 490
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 491 LQAAVQNTVAGIPEVSEE 544
L A ++ A ++ E+
Sbjct: 57 LDKAQEDLSAATSKLEEK 74
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 311 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 490
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 491 LQAAVQNTVAGIPEVSEE 544
L A ++ A ++ E+
Sbjct: 57 LDKAQEDLSAATSKLEEK 74
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 64 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGS 222
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS 122
>AL132877-6|CAE54913.1| 151|Caenorhabditis elegans Hypothetical
protein Y105E8B.1f protein.
Length = 151
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 311 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 490
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 491 LQAAVQNTVAGIPEVSEE 544
L A ++ A ++ E+
Sbjct: 57 LDKAQEDLSAATSKLEEK 74
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 311 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 490
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 491 LQAAVQNTVAGIPEVSEE 544
L A ++ A ++ E+
Sbjct: 57 LDKAQEDLSAATSKLEEK 74
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 311 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 490
+++ +++ A AL A+ A+E + Q + +ER EELR D +K T +
Sbjct: 2 DAIKKKMQAMKIEKDNALDRADA-AEEKVRQITEKLERVEEELR----DTQKKMTQTGDD 56
Query: 491 LQAAVQNTVAGIPEVSEE 544
L A ++ A ++ E+
Sbjct: 57 LDKAQEDLSAATSKLEEK 74
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 386 KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVAGIPEVSEEG 547
+EA+ N E +AEEL++ D+E + KL ++ AG E EEG
Sbjct: 604 EEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKL---YKDAGAGGEEAPEEG 654
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 142 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 234
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
>AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical
protein K09H9.1 protein.
Length = 374
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +2
Query: 257 SPSQRTHRTSARAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 436
S SQ +H + + ++ +Q++ K+L L + + +LE+ + + E+T
Sbjct: 32 SNSQPSHHHTNDSITLPYDATIQKIAEKEKNLSKLLKELS-IVDSSLEEEKASFEKTQSA 90
Query: 437 LRKAHPDVEKNATALREKLQ 496
L K +EK+ LRE+ Q
Sbjct: 91 LLKEKGKIEKDKLMLREEAQ 110
>Z81575-8|CAB04634.1| 433|Caenorhabditis elegans Hypothetical
protein R08H2.9 protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Frame = -3
Query: 385 GLAVRVSERSLETLGEGVE---LLQHGLGAVLPSPC 287
G+A + E++++T+ EG++ LLQ G + P PC
Sbjct: 290 GIAFILMEQAIKTVNEGIKGVWLLQTGTSLLSPVPC 325
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 380 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTV 517
K+K+ SR+N ++TAE++ ++ D K A ++ + + Q V
Sbjct: 94 KSKDESGSSRKNSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKV 139
>AF225921-1|AAF36687.1| 335|Caenorhabditis elegans secretory
carrier membrane protein protein.
Length = 335
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +2
Query: 356 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 466
G+LG+ + + L + +Q++ER A+ELR ++++
Sbjct: 58 GSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDR 94
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +2
Query: 383 AKEALEQSRQNIERTAEELRKAHPDVEKNATALRE-KLQAAVQNTVAGIPEVSEEGVLE 556
AKEAL +QN ER EL+K ++++ +E K + A +N+ A V E VL+
Sbjct: 178 AKEALAAEKQNSEREKMELKKLTEELQRMNLENKELKNRVASENSRA-TGAVQEAQVLQ 235
>AF003739-8|AAK84628.1| 335|Caenorhabditis elegans Scamp (synaptic
vesicle protein)homolog protein 1 protein.
Length = 335
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +2
Query: 356 GALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEK 466
G+LG+ + + L + +Q++ER A+ELR ++++
Sbjct: 58 GSLGNKSAGMDDELFRKQQDLERRAQELRMREEELDR 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,134,323
Number of Sequences: 27780
Number of extensions: 194320
Number of successful extensions: 962
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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