Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N02
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    27   0.087
10_01_0122 + 1495426-1495815                                           24   5.1  
02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    24   5.6  

>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 27.1 bits (57), Expect(2) = 0.087
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 585 GXXXFFFFFFFFF 623
           G   FFFFFFFFF
Sbjct: 84  GYAFFFFFFFFFF 96



 Score = 26.6 bits (56), Expect(2) = 0.087
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 597 FFFFFFFFFXXXXG 638
           FFFFFFFFF    G
Sbjct: 97  FFFFFFFFFFFFSG 110


>10_01_0122 + 1495426-1495815
          Length = 129

 Score = 24.2 bits (50), Expect(2) = 5.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 600 FFFFFFFFXXXXG 638
           FFFFFFFF    G
Sbjct: 14  FFFFFFFFFFLSG 26



 Score = 23.4 bits (48), Expect(2) = 5.1
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 597 FFFFFFFFF 623
           F FFFFFFF
Sbjct: 12  FIFFFFFFF 20


>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 23.8 bits (49), Expect(2) = 5.6
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -2

Query: 622 KKKKKKKKKXXXP 584
           KKKKKKKKK   P
Sbjct: 98  KKKKKKKKKKRWP 110



 Score = 23.4 bits (48), Expect(2) = 5.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2

Query: 637 PXXXXKKKKKKKKK 596
           P    KKKKKKKKK
Sbjct: 64  PVVMKKKKKKKKKK 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,751,182
Number of Sequences: 37544
Number of extensions: 135960
Number of successful extensions: 768
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)