Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_N01
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1294 - 36076524-36076554,36076821-36076891,36077221-360772...    62   4e-10
05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018     62   6e-10

>01_06_1294 -
           36076524-36076554,36076821-36076891,36077221-36077275,
           36077363-36077562,36078614-36078715
          Length = 152

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 33/73 (45%), Positives = 40/73 (54%)
 Frame = +2

Query: 185 PAXLKGLQTXHSKFVRDLVRXVVGHAQYEXXAMELLKVSXXXXXXXXXXXXXGTHIRAKR 364
           P+  KG  T    FVR L+R VVG A YE    ELLKV              GTH RAK+
Sbjct: 29  PSDRKGKSTKRVNFVRGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK 88

Query: 365 KREELSNVLAQMR 403
           KREE++ V+ +MR
Sbjct: 89  KREEMAGVIRKMR 101


>05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018
          Length = 113

 Score = 62.1 bits (144), Expect = 6e-10
 Identities = 33/73 (45%), Positives = 40/73 (54%)
 Frame = +2

Query: 185 PAXLKGLQTXHSKFVRDLVRXVVGHAQYEXXAMELLKVSXXXXXXXXXXXXXGTHIRAKR 364
           P+  KG  T    FVR+L+R V G A YE    ELLKV              GTH RAK+
Sbjct: 29  PSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKK 88

Query: 365 KREELSNVLAQMR 403
           KREE++ VL +MR
Sbjct: 89  KREEMAGVLRKMR 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,028,756
Number of Sequences: 37544
Number of extensions: 163845
Number of successful extensions: 275
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)