Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_M22
         (999 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052012-1|AAK93436.1|  415|Drosophila melanogaster LD47289p pro...    29   7.6  
AE013599-3046|AAM68393.1|  415|Drosophila melanogaster CG16742-P...    29   7.6  
AE013599-3045|AAF57444.1| 1469|Drosophila melanogaster CG16742-P...    29   7.6  

>AY052012-1|AAK93436.1|  415|Drosophila melanogaster LD47289p
           protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 291 PSSKRGQKXNQAKKPLXKGTQKFPTVAIGGXXHXVXLLXNLIXKP-*XYLKPQKXQAXXA 467
           PS++RG+K N AK  L  G  + PT +            + I  P   Y+KP+K  +  A
Sbjct: 76  PSTRRGRKENYAKSLLDAGQNEGPTASTRDSPEVEHSERSSIKAPSPQYVKPEKLFSTPA 135

Query: 468 AKDQ 479
            + Q
Sbjct: 136 QQIQ 139


>AE013599-3046|AAM68393.1|  415|Drosophila melanogaster CG16742-PB,
           isoform B protein.
          Length = 415

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 291 PSSKRGQKXNQAKKPLXKGTQKFPTVAIGGXXHXVXLLXNLIXKP-*XYLKPQKXQAXXA 467
           PS++RG+K N AK  L  G  + PT +            + I  P   Y+KP+K  +  A
Sbjct: 76  PSTRRGRKENYAKSLLDAGQNEGPTASTRDSPEVEHSERSSIKAPSPQYVKPEKLFSTPA 135

Query: 468 AKDQ 479
            + Q
Sbjct: 136 QQIQ 139


>AE013599-3045|AAF57444.1| 1469|Drosophila melanogaster CG16742-PA,
            isoform A protein.
          Length = 1469

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 291  PSSKRGQKXNQAKKPLXKGTQKFPTVAIGGXXHXVXLLXNLIXKP-*XYLKPQKXQAXXA 467
            PS++RG+K N AK  L  G  + PT +            + I  P   Y+KP+K  +  A
Sbjct: 1130 PSTRRGRKENYAKSLLDAGQNEGPTASTRDSPEVEHSERSSIKAPSPQYVKPEKLFSTPA 1189

Query: 468  AKDQ 479
             + Q
Sbjct: 1190 QQIQ 1193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,369,050
Number of Sequences: 53049
Number of extensions: 374242
Number of successful extensions: 263
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5058363141
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)