Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_M21
(797 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.004
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.005
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.14
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.49
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.58
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 4.1
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 27 4.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.1
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 4.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 5.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 7.2
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 9.5
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +3
Query: 585 PPPPPXXFXCXXXXXPPPPPPPXPXXKKKKK 677
PPPPP F PPPPPPP K+K K
Sbjct: 11 PPPPPPGFE--PPSQPPPPPPPGYVKKRKNK 39
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 581 PXXPPPXXFXLXXXXXXPPPPPPXPXXKKKKKKK 682
P PPP PPPPP P KK+K K
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNK 39
Score = 26.6 bits (56), Expect(2) = 0.060
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 630 PPPPPPPXPXXKKKKKKKXXXXPPPPPXP 716
PP PPP P + PPPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPS---QPPPPPPP 30
Score = 24.6 bits (51), Expect(2) = 0.060
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 700 PPPPPPPXXXK 732
PPPPPPP K
Sbjct: 24 PPPPPPPGYVK 34
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.005
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 558 PPXXXKXXXPPPPPXXFXCXXXXXPPPPPPP 650
PP PPPPP PPPPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.5 bits (78), Expect = 0.009
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 558 PPXXXKXXXPPPPPXXFXCXXXXXPPPPPPPXPXXKKKKKKKXXXXPPPPPXP 716
PP PPPPP PPPPPPP P + P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP-PAVSAGGSRYYAPAPQAEPEP 803
Score = 35.1 bits (77), Expect = 0.012
Identities = 18/45 (40%), Positives = 18/45 (40%)
Frame = +3
Query: 585 PPPPPXXFXCXXXXXPPPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
PPPPP P P PPP P PPPPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAP---------IMGGPPPPPPPP 768
Score = 29.9 bits (64), Expect = 0.44
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Frame = +3
Query: 573 KXXXPPPPPXXFXC-XXXXXPPPPPPP---XPXXKKKKKKKXXXXPPPPPXPP 719
K PPPP P PPP P P PPPPP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 4/51 (7%)
Frame = +2
Query: 581 PXXPPPXXFXLXXXXXXPPPPPPXP----XXKKKKKKKXXXXXPPPPXPPP 721
P PPP P PPP P PPPP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 776 PPPPPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = +3
Query: 558 PPXXXKXXXPPPPPXXFXCXXXXXPPPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
PP PP PPPPPPP PPP PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +3
Query: 630 PPPPPPPXPXXKKK----KKKKXXXXPPPPPXP 716
PPPPPPP + K PPPPP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 30.3 bits (65), Expect = 0.33
Identities = 35/165 (21%), Positives = 39/165 (23%), Gaps = 5/165 (3%)
Frame = +3
Query: 237 PPGNGAEKNXXXPPPFXKIPXPXPGGXXPXXFXNPPFXKFXPPXXKXXFXPXXXFXKXXF 416
P GNG+ + PPP P P PP + PP P
Sbjct: 326 PIGNGSSNSSLPPPP------PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
Query: 417 XXXGGXKXPPXGGGAPPXXXXKXXXXPXXGEKKKKXXXGXXGXXXXXPPXXXKXXXPPPP 596
PP P P G + P PP
Sbjct: 380 SSSRAVSNPP--APPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS--LPPSA 435
Query: 597 PXXFXCXXXXXPPPPP-----PPXPXXKKKKKKKXXXXPPPPPXP 716
P PP PP PP P P PPP P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 29.9 bits (64), Expect = 0.44
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 633 PPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
PP PP P + ++ P PPP PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPP 258
Score = 29.1 bits (62), Expect = 0.77
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 5/33 (15%)
Frame = +2
Query: 635 PPPPPXPXXKKKKKK-----KXXXXXPPPPXPP 718
PPPPP P + + K PPPP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +3
Query: 633 PPPPPPXPXXKKKKKKKXXXXPPPPPXP 716
PP PPP PPPPP P
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 585 PPPPPXXFXCXXXXXPPPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
P PPP PP PP P PP PP
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +3
Query: 228 PXXPPGNGAEKNXXXPPPFXKIPXPXPGGXXPXXFXNPP 344
P PP + A + PP P P P P PP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 630 PPPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
PP PP PPPPP PP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 630 PPPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
PPP P PPPPP PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Score = 25.0 bits (52), Expect(2) = 0.49
Identities = 10/31 (32%), Positives = 11/31 (35%)
Frame = +3
Query: 558 PPXXXKXXXPPPPPXXFXCXXXXXPPPPPPP 650
PP + P PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 24.6 bits (51), Expect(2) = 2.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 585 PPPPPXXFXCXXXXXPPPPPPPXP 656
P PP P PPPPP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 23.0 bits (47), Expect(2) = 0.49
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +3
Query: 636 PPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
P PP K+ PPPP PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 21.0 bits (42), Expect(2) = 2.3
Identities = 8/24 (33%), Positives = 9/24 (37%)
Frame = +3
Query: 633 PPPPPPXPXXKKKKKKKXXXXPPP 704
P PPPP P + P P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMP 259
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 585 PPPPPXXFXCXXXXXPPPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
PP P P PPPPP PP P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 561 PXXXKXXXPPPPPXXFXCXXXXXPPPPPPPXPXXKKKKKKKXXXXPPPPPXP 716
P PPPPP PPP PP P PPPP P
Sbjct: 1699 PPQMSAPTPPPPP------MSVPPPPSAPPMPAGPPS--------APPPPLP 1736
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.2 bits (55), Expect = 5.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 630 PPPPPPPXP 656
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 638 PPPPXPXXKKKKKKKXXXXXPPPPXPP 718
P P P K +KK P PP PP
Sbjct: 154 PVPKKPSKPSKPRKKVPVSHPLPPTPP 180
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/46 (28%), Positives = 14/46 (30%)
Frame = +3
Query: 228 PXXPPGNGAEKNXXXPPPFXKIPXPXPGGXXPXXFXNPPFXKFXPP 365
P P + PP IP P P P PP PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 630 PPPPPPPXPXXKKK 671
PPPPPPP +KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 633 PPPPPPXPXXKKKK 674
PPPPPP P +KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 4.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 697 PPPPPPPP 720
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 26.2 bits (55), Expect = 5.4
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 630 PPPPPPPXP 656
PPPPPPP P
Sbjct: 945 PPPPPPPPP 953
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +3
Query: 585 PPPPPXXFXCXXXXXPPPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
PPPPP P PPPPP PP
Sbjct: 908 PPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPP 952
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 632 PPPPPPXPXXKKKKKKKXXXXXPPPPXPP 718
PPPPPP K PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 632 PPPPPPXPXXKKKKKKKXXXXXPPPPXPPP 721
PP PPP K PPP PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 630 PPPPPPPXPXXKKKKKKKXXXXPPPPPXPP 719
PP PPP K PPP PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 630 PPPPPPPXPXXKKKKKKKXXXXPPPPPXP 716
PPP P K++K K PP P P
Sbjct: 415 PPPSIASSPESKRRKCPKKFVARPPVPHP 443
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,805,835
Number of Sequences: 5004
Number of extensions: 31661
Number of successful extensions: 475
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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