Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_M18
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical ...    30   2.6  
U70853-1|AAB09143.2|  439|Caenorhabditis elegans Hypothetical pr...    29   6.0  

>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical protein
            R10E8.6 protein.
          Length = 1696

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = +2

Query: 227  CIKVTIFLVRRVLQTIRFFLRKSTM*SSIQTEGMFAVLPNPENNEASI-ESSHHTVDIGL 403
            C  V++ ++R+V + +R+F+ +S   S  QT  + AV  N ++ +  I +S+ HT+ +  
Sbjct: 1371 CAFVSVEVLRKVCKDLRYFVDRSRSKSKFQTNDI-AVSLNSDDLKLRIRQSNAHTLFVYY 1429

Query: 404  DRPI 415
             +PI
Sbjct: 1430 KQPI 1433


>AF024499-6|AAB70354.1|  560|Caenorhabditis elegans Hypothetical
           protein F42G2.2 protein.
          Length = 560

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = +2

Query: 356 NEASIESSHHTVDIGLDRPIESHRNTRDLRFWNPREKLPLPNASSV*PQAKYILIWEIVT 535
           N  SI      ++ G    ++  RN +D+   N    +P  + S    ++ YI +W+I  
Sbjct: 165 NIHSIIHKPEIIEFGDIVEMDQWRNAKDIHLRNFFVSIPFEHFSHC--ESAYIEVWKISA 222

Query: 536 DDMHRTIK 559
           DD+ + IK
Sbjct: 223 DDIQKLIK 230


>U70853-1|AAB09143.2|  439|Caenorhabditis elegans Hypothetical
           protein M01H9.2 protein.
          Length = 439

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
 Frame = +3

Query: 210 PGTAMAVSR*QYSSCAEYCRPSD----SSFENRRCEARSKQ---KVCSQCY-QIQKITRH 365
           PG AM   R    +CA++C  S     S+   + C+        ++C +CY +++  ++ 
Sbjct: 35  PGYAMVYCRKTCGNCADFCEDSKFITCSAERKKDCDDMLSDYCPRLCGKCYAKLKPDSKR 94

Query: 366 PLNLPIIQLILDLTGRSRATVT 431
              +P+ Q   +    S  T T
Sbjct: 95  TKTIPVTQFKRNPAATSTTTTT 116


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,461,277
Number of Sequences: 27780
Number of extensions: 424741
Number of successful extensions: 1252
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)