Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_M17
         (930 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   4.5  
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 31   6.0  
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.     31   6.0  
CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.               31   7.9  
BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.       31   7.9  

>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.5 bits (68), Expect = 4.5
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 152 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP---KADLTSSLP 295
           T    +TT RTS  +P TTT+  T    + ++  T TVP       T+S+P
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVPTTMTVSTTTSVP 186


>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 148  GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPGCSRWEVK 327
            G G   I  R +    P+      + +  +   ++  D  +GR  FKP   PG + W +K
Sbjct: 824  GMGKPAITKRKFSPGRPRSKQGAWSTHNTVSPPSWSPDISEGREIFKPRQLPGSAIWSIK 883


>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
          Length = 3310

 Score = 31.1 bits (67), Expect = 6.0
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +1

Query: 148 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPGCSRWEVK 327
           G G   I  R +    P+      + +  +   ++  D  +GR  FKP   PG + W +K
Sbjct: 269 GMGKPAITKRKFSPGRPRSKQGAWSTHNTVSPPSWSPDISEGREIFKPRQLPGSAIWSIK 328


>CR457114-1|CAG33395.1|  364|Homo sapiens HAVCR1 protein.
          Length = 364

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +2

Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 301
           T T    T   TT  T++ +P TTT++ T T +STT  +  T      T+S+P++
Sbjct: 153 TTTVPMTTVPTTTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPVT 205


>BC013325-1|AAH13325.1|  364|Homo sapiens HAVCR1 protein protein.
          Length = 364

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +2

Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 301
           T T    T   TT  T++ +P TTT++ T T +STT  +  T      T+S+P++
Sbjct: 153 TTTVPMTTVPTTTVPTTMSIPTTTTVLTTMT-VSTTTSVP-TTTSIPTTTSVPVT 205


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,574,197
Number of Sequences: 237096
Number of extensions: 2025013
Number of successful extensions: 11838
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11786
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)