Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_M17
(930 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 38 0.008
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 33 0.22
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 33 0.22
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 33 0.38
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 33 0.38
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 31 0.89
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 31 1.6
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 2.1
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 30 2.7
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 29 6.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 6.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 6.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 6.3
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 28 8.3
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 28 8.3
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 8.3
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 8.3
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 286
TPT ET T TT T+ TTT ET T +TT T T P T+
Sbjct: 111 TPTTETTTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTT 160
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLP 295
TPT T T TT T+ P TTT T T +TT T T T++ P
Sbjct: 124 TPTTTTTTPTTTTTETT-TTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTP 175
Score = 31.9 bits (69), Expect = 0.67
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLS-TTVHITWTVPKADLTSS 289
T T T T TT T+ P TTT T T + TT T T P + T++
Sbjct: 68 TTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTT 119
Score = 31.9 bits (69), Expect = 0.67
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI-TWTVPKADLTSSLPLS 301
T T T T TT T+ +P TTT T T +TT T T P T + S
Sbjct: 197 TTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTS 252
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 286
T T T T TT T+ P TTT T TT T T P T+
Sbjct: 82 TTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
TPT T T T T+ P TTT T T +TT T T P T +
Sbjct: 101 TPTTTTETTTTPTTETTTT-PTTTTPTTTTTTPTTTTTETTTTPTTTTTET 150
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLT 283
TPT T T TT T+ +TTT T T +TT T T + T
Sbjct: 94 TPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTT 142
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 286
TPT T T TT T+ P TTT T T +TT T T T+
Sbjct: 77 TPTTPTTTT--TTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTT 124
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 286
TPT T T TT T+ TTT T T +TT T T P T+
Sbjct: 119 TPTTTTPTTTTTTPTTTTT-ETTTTPTTTTTETTTTPTTTTTTPTTTTTT 167
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 140 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 268
PT T T TT T+ TTT T T +TT T T P
Sbjct: 217 PTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTP 259
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 137 TPTQETA--TNLLTTARTSLILPKTTTLM-ETATNLSTTVHITWTVPKADLTS 286
TPT T T TT T+ P TTT + T T TT T T P T+
Sbjct: 188 TPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTT 240
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/51 (33%), Positives = 21/51 (41%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
TPT T T TT + TTT T T +T T T P T++
Sbjct: 233 TPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTT 283
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
T T T TT T +TTT T T TT T T P T++
Sbjct: 243 TTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTA 293
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 116 TRLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 268
TR+ T T ET T +T T+ + P TTT T T ++TT T P
Sbjct: 193 TRIPTTVTTTTETTTTPQSTTTTTTVPPTTTTSTTTTTTIATTTTSTSPAP 243
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 127 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 267
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 98 YGQRSRTRLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 277
+G+ SR+ W P ET TT T+ +P TTT+ T T +T T T A
Sbjct: 291 FGEESRS----WPLPA-ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAP 345
Query: 278 LTSSL 292
T+++
Sbjct: 346 TTTTM 350
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 98 YGQRSRTRLG*WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKAD 277
+G+ SR+ W P ET TT T+ +P TTT+ T T +T T T A
Sbjct: 291 FGEESRS----WPLPA-ETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTTTTTTAAP 345
Query: 278 LTSSL 292
T+++
Sbjct: 346 TTTTM 350
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 127 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 267
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 127 VVENADSGNGYEPIDN--RPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 267
+VE+ D GN P ++ P +N PK + NG +P+DN YV+ P
Sbjct: 40 LVESVDDGNSRTPYNSIYEPLSLNKPKPDGRSSNGKKPVDN--EYVNLP 86
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 268
TPT T+T TT T TTT T T +T T T+P
Sbjct: 86 TPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMP 129
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 143 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 268
T T T TT+ T+ P TTT T STT T T P
Sbjct: 61 TTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHI---TWTVPKADLTSSLPLS 301
T T T T+ + T T++++ TTT +TTV + T TVP + T++ PL+
Sbjct: 193 TTTTTTTTSPMNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLN 250
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 131 WKTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 301
W T T T TT TS + TTT++ T T TVP + T+++PL+
Sbjct: 183 WVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTT-------TTTVPTNETTTTVPLN 232
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 31.5 bits (68), Expect = 0.89
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS-SLPLS 301
T T T T TT T+ P TTT T T +TT T T P T+ S PL+
Sbjct: 89 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTT--TTTPTTTTTTPTTTTTTRSTPLT 142
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = +2
Query: 134 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
KT Q T T + TT RTS +P TTT + + T P D T +
Sbjct: 288 KTNPQITTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTRQPNFDKTKT 339
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +2
Query: 134 KTPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLXAR 313
K ++ N+ TT I TTT M T T ST + T T P+ ++P S R
Sbjct: 274 KPEKKKEVFNVFTTKTNPQI---TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFSTTTR 330
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT--WTVPKADLTSSLP 295
T + T T TT T+ P TTT T T +TT+ T T P T++ P
Sbjct: 299 TESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKP 353
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNL-STTVHITWTVPKADLTSS 289
TPT T T TT TS P TTT T T STT T T+ T++
Sbjct: 293 TPTT-TTTESTTTETTSTTTPTTTTTAPTTTTTASTTTFKTTTITTTTQTTT 343
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
TPT T T TT + TTT T T STT T T T++
Sbjct: 268 TPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTA 318
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNL--STTVHITWTVPKADLTSS 289
TPT T T TT T+ P TTT T T +TT T T P T+S
Sbjct: 275 TPTTTTTTP-TTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTAPTTTTTAS 326
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 268
T T T T +T T+ P TTT E L+T TWT P
Sbjct: 627 TSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAP 667
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 268
T T T T +T T+ P TTT E L+T TWT P
Sbjct: 627 TSTSTTTTTTTSTTATTTPQPTTTTTSEKPVTLTTQ---TWTAP 667
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 137 TPTQETA--TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
T T+ TA T + T ART+ P TTT + + T L TT+ + + D +S+
Sbjct: 379 TATRTTAKITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTESTDGSST 431
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 268
T T A N+ TT T+ I P T T T +TTV T T P
Sbjct: 30 TTTTSPAPNITTTTTTTTIAPPTNTTTTILTT-TTTVTTTTTSP 72
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 304
TP T T TT + + TTT T T TT T P T+S+P ++
Sbjct: 416 TPLPTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTT-PAPTTTSTTSIPTTI 470
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -3
Query: 925 PPGFXGXNXXXPPXXGG--GXNRFPXXPXXPGXKGXXXXXGXXKXGPXKXKXPFSP 764
P G G PP G G + P P PG G G + GP P P
Sbjct: 176 PAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +2
Query: 101 GQRSRTRLG*WKTPTQETATNLLTTARTSLI-LPKTTTLMETATNLSTTVHITWTVPKAD 277
GQ T T T + T TT TS +P TTT E AT T T +PK
Sbjct: 104 GQNPFTTTSTTTTTTTQKPTTSTTTTTTSTTPVPTTTTTTEAATTTVLTT-TTEELPKQQ 162
Query: 278 LTSSL 292
L L
Sbjct: 163 LAGRL 167
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 301
T T+E T T+ P TTT T T T T P T+ PL+
Sbjct: 325 TTTEEATTTTEEITTTTTKAPTTTTTQSTTTTTQLPTTTTTTEPTTTTTTVDPLA 379
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -3
Query: 925 PPGFXGXNXXXPPXXGG--GXNRFPXXPXXPGXKGXXXXXGXXKXGPXKXKXPFSP 764
P G G PP G G + P P PG G G + GP P P
Sbjct: 176 PAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -3
Query: 925 PPGFXGXNXXXPPXXGG--GXNRFPXXPXXPGXKGXXXXXGXXKXGPXKXKXPFSP 764
P G G PP G G + P P PG G G + GP P P
Sbjct: 176 PAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -3
Query: 925 PPGFXGXNXXXPPXXGG--GXNRFPXXPXXPGXKGXXXXXGXXKXGPXKXKXPFSP 764
P G G PP G G + P P PG G G + GP P P
Sbjct: 176 PAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPPGPAGP 231
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 143 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 301
T T T +T T+L TTT T T + +I T+P T S L+
Sbjct: 213 TTTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSPALT 265
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 143 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 301
T T T +T T+L TTT T T + +I T+P T S L+
Sbjct: 213 TTTTTTTTITPKHTNLTTTATTTKKVTTTERAHLENILLTIPLKSTTQSPALT 265
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 137 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 295
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 497 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 553
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 137 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 295
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 338 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 394
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -3
Query: 925 PPGFXGXNXXXPPXXGGGXNRFPXXPXXPGXKGXXXXXGXXKXGPXKXKXPFSP 764
PPG G P G N P P PG G G K GP P P
Sbjct: 153 PPGPDGEPGVRGPNGPPGPNGHPGQPGRPGPAGPAGPEG--KDGPVGPHGPAGP 204
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 143 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 286
T T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 409 TSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 143 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTS 286
T T T + +T+ T TTTL + + STT T TV + TS
Sbjct: 409 TSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTSTVTTSPSTS 456
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 137 TPTQETATNLLTT----ARTSLILPKTTTLMETATNLSTTVHITWTVP-KADLTSSLP 295
T T +T+T + TT T+ PK TT ETAT S+T +T P T++LP
Sbjct: 378 TTTVQTSTTVPTTPSKTTATTTTTPKPTT-TETATTSSSTTTVTTQKPTTVTSTTTLP 434
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 140 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
PT T + TT TS T+T T T ST+ H T + TSS
Sbjct: 274 PTTTVVTTVPTTTATST---STSTASTTTTTPSTSTHTTTVTYSTNATSS 320
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 140 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
PT T + TT TS T+T T T ST+ H T + TSS
Sbjct: 256 PTTTVVTTVPTTTATST---STSTASTTTTTPSTSTHTTTVTYSTNATSS 302
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +2
Query: 137 TPTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSS 289
T T T T TT T+ +TTT + T+T+ +T T T P T++
Sbjct: 269 TTTSTTTTEPTTTTSTTT---QTTTTVPTSTSTISTTSTTTTTPTTTTTTT 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,345,145
Number of Sequences: 27780
Number of extensions: 273957
Number of successful extensions: 955
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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