Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_M16
(1221 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 1.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 1.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.0
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 27 4.0
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 4.0
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 5.1
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 23 6.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 22 7.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 9.2
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 23.4 bits (48), Expect(2) = 1.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 190 PPPPPPPP 197
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 23.4 bits (48), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 307 PPPPPPPP 314
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 463 APXPPPPPPXP 495
AP PPPPPP P
Sbjct: 2 APAPPPPPPAP 12
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 27.5 bits (58), Expect = 4.0
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +3
Query: 270 KKKKXKKXXKKKKKXKKXKXXK 335
KKKK KK KKKK K K K
Sbjct: 436 KKKKKKKKNNKKKKKNKRKNIK 457
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 4.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 466 PXPPPPPPXPXGXGGXSP 519
P PPPPPP G G P
Sbjct: 761 PPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 7.0
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 466 PXPPPPPPXPXGXGG 510
P PPPPPP GG
Sbjct: 775 PPPPPPPPPAVSAGG 789
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 23.8 bits (49), Expect(2) = 5.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 463 APXPPPPPP 489
+P PPPPPP
Sbjct: 369 SPPPPPPPP 377
Score = 21.4 bits (43), Expect(2) = 5.1
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 475 PPPPPXPXGXGGXSP 519
PPPPP P SP
Sbjct: 370 PPPPPPPPELLNHSP 384
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.4 bits (48), Expect(2) = 6.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 1095 PPPPPPPP 1102
Score = 21.4 bits (43), Expect(2) = 6.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 463 APXPPPPPP 489
A PPPPPP
Sbjct: 1093 AVPPPPPPP 1101
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 22.2 bits (45), Expect(2) = 7.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 463 APXPPPPP 486
AP PPPPP
Sbjct: 1704 APTPPPPP 1711
Score = 22.2 bits (45), Expect(2) = 7.8
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +1
Query: 466 PXPPPPPPXPXGXGGXSP 519
P PP PP P G P
Sbjct: 1715 PPPPSAPPMPAGPPSAPP 1732
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 466 PXPPPPPPXPXGXGG 510
P PPPPPP GG
Sbjct: 946 PPPPPPPPLVSAAGG 960
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,405,636
Number of Sequences: 5004
Number of extensions: 13783
Number of successful extensions: 194
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 661404424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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