Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_M16
(1221 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 0.31
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 26 0.53
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 26 0.53
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 26 1.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 1.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 1.2
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 1.2
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 1.2
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 25 2.1
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 25 2.1
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 25 2.1
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 25 3.7
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 3.8
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 3.8
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 30 3.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 26 4.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 26 4.6
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 29 5.0
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 29 5.0
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 29 5.0
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 24 5.6
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 26 5.6
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 26 5.6
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 24 6.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 6.7
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.7
U23177-9|AAA64327.1| 217|Caenorhabditis elegans Hypothetical pr... 25 8.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 23 9.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 25 9.3
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 23 9.5
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 23 9.5
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 23 9.5
Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 23 9.6
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 23 9.6
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 23 9.7
Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical pr... 23 9.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect(2) = 0.31
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 472 PPPPPPXPXGXGGXSP 519
PPPPPP P G G P
Sbjct: 770 PPPPPPPPGGFKGGPP 785
Score = 23.4 bits (48), Expect(2) = 0.31
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 758 PPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect(2) = 0.31
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 472 PPPPPPXPXGXGGXSP 519
PPPPPP P G G P
Sbjct: 770 PPPPPPPPGGFKGGPP 785
Score = 23.4 bits (48), Expect(2) = 0.31
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 758 PPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect(2) = 0.31
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 472 PPPPPPXPXGXGGXSP 519
PPPPPP P G G P
Sbjct: 353 PPPPPPPPGGFKGGPP 368
Score = 23.4 bits (48), Expect(2) = 0.31
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 341 PPPPPPPP 348
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.8 bits (54), Expect(2) = 0.53
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 466 PXPPPPPPXP 495
P PPPPPP P
Sbjct: 765 PPPPPPPPPP 774
Score = 25.4 bits (53), Expect(2) = 0.53
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 472 PPPPPPXPXG 501
PPPPPP P G
Sbjct: 808 PPPPPPPPPG 817
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.8 bits (54), Expect(2) = 0.53
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 466 PXPPPPPPXP 495
P PPPPPP P
Sbjct: 765 PPPPPPPPPP 774
Score = 25.4 bits (53), Expect(2) = 0.53
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 472 PPPPPPXPXG 501
PPPPPP P G
Sbjct: 808 PPPPPPPPPG 817
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 463 APXPPPPPPXP 495
+P PPPPPP P
Sbjct: 1335 SPSPPPPPPPP 1345
Score = 23.8 bits (49), Expect(2) = 1.1
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 472 PPPPPPXPXGXGGXSP 519
PPPPPP P +P
Sbjct: 1339 PPPPPPPPPPSDDLTP 1354
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 463 APXPPPPPPXPXGXGG 510
AP PPPPPP P G GG
Sbjct: 648 APPPPPPPP-PSGAGG 662
Score = 26.2 bits (55), Expect(2) = 1.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 463 APXPPPPPPXPXG 501
A PPPPPP P G
Sbjct: 628 AAPPPPPPPPPMG 640
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 475 PPPPPXPXGXGGXSP 519
PPPPP P G P
Sbjct: 649 PPPPPPPPPSGAGGP 663
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 3.8
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 463 APXPPPPPPXPXGXGG 510
AP PPPPPP P G GG
Sbjct: 474 APPPPPPPP-PSGAGG 488
Score = 26.2 bits (55), Expect(2) = 1.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 463 APXPPPPPPXPXG 501
A PPPPPP P G
Sbjct: 454 AAPPPPPPPPPMG 466
Score = 23.8 bits (49), Expect(2) = 1.2
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 475 PPPPPXPXGXGGXSP 519
PPPPP P G P
Sbjct: 475 PPPPPPPPPSGAGGP 489
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 466 PXPPPPPPXPXGXG 507
P PPPPPP P G G
Sbjct: 63 PPPPPPPPAPIGGG 76
Score = 26.6 bits (56), Expect(2) = 1.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 472 PPPPPPXPXGXGG 510
PPPPPP P GG
Sbjct: 63 PPPPPPPPAPIGG 75
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 463 APXPPPPPPXP 495
AP PPPPP P
Sbjct: 59 APALPPPPPPP 69
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 466 PXPPPPPPXPXGXG 507
P PPPPPP P G G
Sbjct: 63 PPPPPPPPAPIGGG 76
Score = 26.6 bits (56), Expect(2) = 1.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 472 PPPPPPXPXGXGG 510
PPPPPP P GG
Sbjct: 63 PPPPPPPPAPIGG 75
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 463 APXPPPPPPXP 495
AP PPPPP P
Sbjct: 59 APALPPPPPPP 69
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 25.0 bits (52), Expect(2) = 2.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 463 APXPPPPPP 489
AP PPPPPP
Sbjct: 187 APPPPPPPP 195
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 472 PPPPPPXPXGXGG 510
PPPPPP P G
Sbjct: 188 PPPPPPPPQNPRG 200
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 25.0 bits (52), Expect(2) = 2.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 463 APXPPPPPP 489
AP PPPPPP
Sbjct: 187 APPPPPPPP 195
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 472 PPPPPPXPXGXGG 510
PPPPPP P G
Sbjct: 188 PPPPPPPPQNPRG 200
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 25.0 bits (52), Expect(2) = 2.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 463 APXPPPPPP 489
AP PPPPPP
Sbjct: 187 APPPPPPPP 195
Score = 24.2 bits (50), Expect(2) = 2.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 472 PPPPPPXPXGXGG 510
PPPPPP P G
Sbjct: 188 PPPPPPPPQNPRG 200
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +3
Query: 270 KKKKXKKXXKKKKKXKKXKXXKXXXK 347
KKKK KK +KKKK KK K K K
Sbjct: 763 KKKKDKKEKEKKKKSKKSKKSKKEKK 788
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 25.0 bits (52), Expect(2) = 3.7
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 463 APXPPPPPP 489
AP PPPPPP
Sbjct: 87 APLPPPPPP 95
Score = 23.4 bits (48), Expect(2) = 3.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 122 PPPPPPTP 129
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 463 APXPPPPPPXPXGXGGXSP 519
AP PPPPPP GG P
Sbjct: 535 APTPPPPPPVGMANGGPPP 553
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 472 PPPPPPXPXGXGG 510
PPPPPP P G GG
Sbjct: 31 PPPPPPSPCGCGG 43
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 472 PPPPPPXPXGXGG 510
PPPPPP P G GG
Sbjct: 34 PPPPPPSPCGGGG 46
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 25.8 bits (54), Expect(2) = 4.6
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 3/19 (15%)
Frame = +1
Query: 472 PPPPPP---XPXGXGGXSP 519
PPPPPP P G GG P
Sbjct: 327 PPPPPPSRFGPPGMGGMPP 345
Score = 22.2 bits (45), Expect(2) = 4.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 466 PXPPPPPPXP 495
P PPP PP P
Sbjct: 282 PMPPPMPPTP 291
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 25.8 bits (54), Expect(2) = 4.6
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 3/19 (15%)
Frame = +1
Query: 472 PPPPPP---XPXGXGGXSP 519
PPPPPP P G GG P
Sbjct: 317 PPPPPPSRFGPPGMGGMPP 335
Score = 22.2 bits (45), Expect(2) = 4.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 466 PXPPPPPPXP 495
P PPP PP P
Sbjct: 272 PMPPPMPPTP 281
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 463 APXPPPPPPXPXGXGG 510
AP PPPPPP G GG
Sbjct: 64 APPPPPPPPAFGGLGG 79
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 463 APXPPPPPPXPXGXGG 510
AP PPPPPP G GG
Sbjct: 64 APPPPPPPPAFGGLGG 79
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 29.5 bits (63), Expect = 5.0
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 463 APXPPPPPPXPXGXGG 510
AP PPPPPP G GG
Sbjct: 64 APPPPPPPPAFGGLGG 79
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 24.2 bits (50), Expect(2) = 5.6
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 472 PPPPPPXPXGXGGXSP 519
PPPPPP P P
Sbjct: 755 PPPPPPPPLAAAPPQP 770
Score = 23.4 bits (48), Expect(2) = 5.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 754 PPPPPPPP 761
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 25.8 bits (54), Expect(2) = 5.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 466 PXPPPPPPXP 495
P PPPPPP P
Sbjct: 674 PPPPPPPPMP 683
Score = 21.8 bits (44), Expect(2) = 5.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 472 PPPPPPXPXG 501
PPPPPP G
Sbjct: 675 PPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 25.8 bits (54), Expect(2) = 5.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 466 PXPPPPPPXP 495
P PPPPPP P
Sbjct: 674 PPPPPPPPMP 683
Score = 21.8 bits (44), Expect(2) = 5.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 472 PPPPPPXPXG 501
PPPPPP G
Sbjct: 675 PPPPPPPMPG 684
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 24.2 bits (50), Expect(2) = 6.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 472 PPPPPPXPXGXG 507
PPPPPP G G
Sbjct: 67 PPPPPPPQCGCG 78
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 66 PPPPPPPP 73
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 6.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 472 PPPPPPXPXGXGGXSP 519
PPPPPP P G G +P
Sbjct: 39 PPPPPPPPCGGGYEAP 54
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.1 bits (62), Expect = 6.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 472 PPPPPPXPXGXGGXSP 519
PPPPPP G GG +P
Sbjct: 31 PPPPPPCGGGCGGGAP 46
>U23177-9|AAA64327.1| 217|Caenorhabditis elegans Hypothetical
protein C56G2.15 protein.
Length = 217
Score = 25.0 bits (52), Expect(2) = 8.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 463 APXPPPPPP 489
AP PPPPPP
Sbjct: 177 APPPPPPPP 185
Score = 22.2 bits (45), Expect(2) = 8.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 466 PXPPPPPPXP 495
P PPPPP P
Sbjct: 179 PPPPPPPMAP 188
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 1012 PPPPPPPP 1019
Score = 23.4 bits (48), Expect(2) = 9.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 1013 PPPPPPPP 1020
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 24.6 bits (51), Expect(2) = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 475 PPPPPXPXGXG 507
PPPPP P G G
Sbjct: 114 PPPPPPPSGLG 124
Score = 22.2 bits (45), Expect(2) = 9.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 463 APXPPPPP 486
AP PPPPP
Sbjct: 113 APPPPPPP 120
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 445 PPPPPPPP 452
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 446 PPPPPPPP 453
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 516 PLPPPPPP 523
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 519 PPPPPPKP 526
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 516 PLPPPPPP 523
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 519 PPPPPPKP 526
>Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical
protein F42G4.3a protein.
Length = 603
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 3 PPPPPPPP 10
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 4 PPPPPPPP 11
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 393 PPPPPPPP 400
Score = 23.4 bits (48), Expect(2) = 9.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 394 PPPPPPPP 401
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 251 PPPPPPPP 258
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 252 PPPPPPPP 259
>Z81106-2|CAB03220.2| 468|Caenorhabditis elegans Hypothetical
protein R06C1.3 protein.
Length = 468
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 466 PXPPPPPP 489
P PPPPPP
Sbjct: 358 PPPPPPPP 365
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 472 PPPPPPXP 495
PPPPPP P
Sbjct: 359 PPPPPPPP 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,377,186
Number of Sequences: 27780
Number of extensions: 139994
Number of successful extensions: 3619
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2918
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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