Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_M13
         (871 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p pro...    29   6.3  
AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA...    29   6.3  
AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA...    29   6.3  

>BT023940-1|ABB36444.1|  592|Drosophila melanogaster LP20233p
           protein.
          Length = 592

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 276 PXPPPPPXXCXXXXXPPG 329
           P PPPPP  C     PPG
Sbjct: 58  PPPPPPPQHCNCPPGPPG 75



 Score = 29.1 bits (62), Expect = 8.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 274 PPXPPPPXKXVXXXPXPPG 330
           PP PPPP +     P PPG
Sbjct: 57  PPPPPPPPQHCNCPPGPPG 75


>AE014297-2291|AAF55377.2|  594|Drosophila melanogaster CG5225-PA
           protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 276 PXPPPPPXXCXXXXXPPG 329
           P PPPPP  C     PPG
Sbjct: 60  PPPPPPPQHCNCPPGPPG 77



 Score = 29.1 bits (62), Expect = 8.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +1

Query: 274 PPXPPPPXKXVXXXPXPPG 330
           PP PPPP +     P PPG
Sbjct: 59  PPPPPPPPQHCNCPPGPPG 77


>AE014296-856|AAN11603.1|  440|Drosophila melanogaster CG32241-PA
           protein.
          Length = 440

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 274 PPXPPPPXKXVXXXPXPPG 330
           PP PPPP K V   P P G
Sbjct: 206 PPPPPPPPKKVVYTPPPTG 224



 Score = 29.5 bits (63), Expect = 6.3
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 274 PPXPPPPXKXVXXXPXPPG 330
           PP PPPP K V   P P G
Sbjct: 306 PPPPPPPPKKVVYTPPPTG 324


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,228,942
Number of Sequences: 53049
Number of extensions: 309333
Number of successful extensions: 5464
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2916
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)