Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_M03
         (868 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   307   3e-85
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.3  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   9.1  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  307 bits (754), Expect = 3e-85
 Identities = 149/221 (67%), Positives = 165/221 (74%)
 Frame = +3

Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
           MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXDTLYT 476
           TCQ+AY RIEGD IVCAAYSHELPRYGVKVGLTNYAAAY TG             DTLY 
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120

Query: 477 GHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXGLQCPSFHQRF 656
           G TDVTG+EY VEPVD GP AFRCYLDVGL RTTTG+RVFGAMKGAVD GL  P   +RF
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSVKRF 180

Query: 657 XAMMXNPKSSMLKYTGLTSLVCMLLNT*XVLNQDDXDSFKR 779
                  KS   +          + N    L ++D ++FKR
Sbjct: 181 PGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKR 221


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 477  GHTDVTGDEYNVEPVDNGPG 536
            G TD +GD+  ++  DNG G
Sbjct: 2011 GGTDASGDDLEIDACDNGCG 2030


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 354 NKQRTQYGHLQSESRPPGML 295
           +KQ  +Y H   E +PPG L
Sbjct: 152 SKQALKYYHYYLEGQPPGQL 171


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,351
Number of Sequences: 2352
Number of extensions: 17069
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)