Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_M03
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 285 2e-76
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 285 2e-76
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 285 2e-76
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 285 2e-76
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 285 2e-76
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 285 2e-76
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 283 8e-76
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 2e-48
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 179 1e-44
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 53 2e-06
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 285 bits (698), Expect = 2e-76
Identities = 129/180 (71%), Positives = 146/180 (81%)
Frame = +3
Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXDTLYT 476
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 477 GHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXGLQCPSFHQRF 656
G +VTGDEYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVD GL P +RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 650 KIPGYDAESKKFNAEVHRAHIFGLHVAEYMXSL 748
+ PGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 179 RFPGYDSESKEFNAEVHRKHIMGQNVADYMRYL 211
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 285 bits (698), Expect = 2e-76
Identities = 129/180 (71%), Positives = 146/180 (81%)
Frame = +3
Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXDTLYT 476
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 477 GHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXGLQCPSFHQRF 656
G +VTGDEYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVD GL P +RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 650 KIPGYDAESKKFNAEVHRAHIFGLHVAEYMXSL 748
+ PGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 179 RFPGYDSESKEFNAEVHRKHIMGQNVADYMRYL 211
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 285 bits (698), Expect = 2e-76
Identities = 129/180 (71%), Positives = 146/180 (81%)
Frame = +3
Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXDTLYT 476
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 477 GHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXGLQCPSFHQRF 656
G +VTGDEYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVD GL P +RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Score = 53.2 bits (122), Expect = 1e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 650 KIPGYDAESKKFNAEVHRAHIFGLHVAEYMXSL 748
+ PGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 179 RFPGYDSESKEFNAEVHRKHIMGQNVADYMRCL 211
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 285 bits (698), Expect = 2e-76
Identities = 129/180 (71%), Positives = 146/180 (81%)
Frame = +3
Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXDTLYT 476
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 477 GHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXGLQCPSFHQRF 656
G +VTGDEYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVD GL P +RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 650 KIPGYDAESKKFNAEVHRAHIFGLHVAEYMXSL 748
+ PGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 179 RFPGYDSESKEFNAEVHRKHIMGQNVADYMRYL 211
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 285 bits (698), Expect = 2e-76
Identities = 129/180 (71%), Positives = 146/180 (81%)
Frame = +3
Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXDTLYT 476
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 477 GHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXGLQCPSFHQRF 656
G +VTGDEYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVD GL P +RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 650 KIPGYDAESKKFNAEVHRAHIFGLHVAEYMXSL 748
+ PGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 179 RFPGYDSESKEFNAEVHRKHIMGQNVADYMRYL 211
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 285 bits (698), Expect = 2e-76
Identities = 129/180 (71%), Positives = 146/180 (81%)
Frame = +3
Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXDTLYT 476
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG D +Y
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 477 GHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXGLQCPSFHQRF 656
G +VTGDEYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVD GL P +RF
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 187
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 650 KIPGYDAESKKFNAEVHRAHIFGLHVAEYMXSL 748
+ PGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 186 RFPGYDSESKEFNAEVHRKHIMGQNVADYMRYL 218
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 283 bits (693), Expect = 8e-76
Identities = 128/180 (71%), Positives = 145/180 (80%)
Frame = +3
Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXDTLYT 476
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 477 GHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXGLQCPSFHQRF 656
G +VTGDEYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVD GL P +RF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 650 KIPGYDAESKKFNAEVHRAHIFGLHVAEYMXSL 748
+ PGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 179 RFPGYDSESKEFNAEVHRKHIMGQNVADYMRYL 211
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 192 bits (467), Expect = 2e-48
Identities = 84/98 (85%), Positives = 95/98 (96%)
Frame = +3
Query: 117 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 296
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 297 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 410
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 179 bits (435), Expect = 1e-44
Identities = 80/124 (64%), Positives = 94/124 (75%)
Frame = +3
Query: 267 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 446
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 447 XXXXXDTLYTGHTDVTGDEYNVEPVDNGPGAFRCYLDVGLXRTTTGARVFGAMKGAVDXG 626
D +Y G +VTGDEYNVE +D PGAF CYLD GL RTTTG +VFGA+KGAVD G
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 627 LQCP 638
L P
Sbjct: 121 LSIP 124
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 52.8 bits (121), Expect = 2e-06
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 650 KIPGYDAESKKFNAEVHRAHIFGLHVAEYMXSL 748
+ PGYD+ESK+FNAEVHR HI G +VA+YM L
Sbjct: 27 RFPGYDSESKEFNAEVHRKHIMGQNVADYMRYL 59
Score = 40.3 bits (90), Expect = 0.009
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +3
Query: 573 TTTGARVFGAMKGAVDXGLQCPSFHQRF 656
TTTG +VFGA+KGAVD GL P +RF
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRF 28
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,173,998
Number of Sequences: 237096
Number of extensions: 2420048
Number of successful extensions: 4090
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4089
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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