Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L23
         (913 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   5.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   5.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          23   5.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.7  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 134 KFKNTFLILSNFFLNISPYSLEL*NSTDQILKG 36
           K KNT +    + LN  P++  +  ++D+ +KG
Sbjct: 480 KAKNTMIKARQYRLNHKPFTYHIVVNSDKNVKG 512


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 134 KFKNTFLILSNFFLNISPYSLEL*NSTDQILKG 36
           K KNT +    + LN  P++  +  ++D+ +KG
Sbjct: 480 KAKNTMIKARQYRLNHKPFTYHIVVNSDKNVKG 512


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -3

Query: 134 KFKNTFLILSNFFLNISPYSLEL*NSTDQILKG 36
           K KNT +    + LN  P++  +  ++D+ +KG
Sbjct: 106 KAKNTMIKARQYRLNHKPFTYHIVVNSDKNVKG 138


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +3

Query: 267 LMTS*HLEKL*HPLDIVTRYHAGKG*WTILHAVQLTPATNPSV 395
           L TS HL+++  P DI      GKG    L AVQ     N  V
Sbjct: 160 LKTSNHLKQIEIPHDIAVNATTGKGGLVSL-AVQAIDLANTLV 201


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,687
Number of Sequences: 438
Number of extensions: 4374
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)