Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L21
         (832 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    31   0.057
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    27   0.93 
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    26   1.6  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   8.6  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 30.7 bits (66), Expect = 0.057
 Identities = 17/34 (50%), Positives = 21/34 (61%)
 Frame = +2

Query: 287 VANDFSSRHYHRSTAGDAPKRTVRQALPGIFPSN 388
           V ND ++ HYHRS    +PK TV   LP + PSN
Sbjct: 905 VINDENNLHYHRSA---SPKATVAGGLP-LLPSN 934


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 26.6 bits (56), Expect = 0.93
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +3

Query: 303 LHVITTEAQQAMLLKEP 353
           LHVITTE+   +LL EP
Sbjct: 20  LHVITTESLDVLLLSEP 36


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = +2

Query: 155 TDLLELTVNSALKTTLPEKGDVTEGPTVLVLMTKLLKSSTFKD 283
           TDLLE+TVN+       E GD T+ P  +    K+++   FKD
Sbjct: 176 TDLLEITVNNRNM----EDGDETDAPVAM----KIVQPVYFKD 210


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 230 PTVLVLMTKLLKSSTFKDEVANDFSSRHYHRSTAGDAPKRTVRQALP 370
           P +L+L++  +  S   D      SSR+YH + AG  P   +R   P
Sbjct: 9   PALLLLVSVQVNYSLQYDSAE---SSRYYHPAGAGSEPGSNLRYDAP 52


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +1

Query: 538 QHKDHTIHCISLEMEXXCXQFVNYDNRPNNAGFYPKXPYSE 660
           QH  +T   ++L+ E    Q   Y    N A   P+  YSE
Sbjct: 147 QHHYYTPQLLNLDQEQLQTQTFTYVTSSNEAFAAPEPNYSE 187


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,649
Number of Sequences: 2352
Number of extensions: 12792
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)