Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L21
         (832 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    27   0.21 
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    27   0.21 
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    25   0.86 
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    24   2.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   4.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   4.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   6.0  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 537 DYNSYYGDFQNNYKDKYN 484
           +YN+Y  ++ NNY + YN
Sbjct: 93  NYNNYNNNYNNNYNNNYN 110



 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 528 SYYGDFQNNYKDKYN 484
           S Y ++ NNY + YN
Sbjct: 92  SNYNNYNNNYNNNYN 106



 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 531 NSYYGDFQNNYKDKY 487
           N+Y  ++ NNYK  Y
Sbjct: 103 NNYNNNYNNNYKKLY 117


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 537 DYNSYYGDFQNNYKDKYN 484
           +YN+Y  ++ NNY + YN
Sbjct: 93  NYNNYNNNYNNNYNNNYN 110



 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 528 SYYGDFQNNYKDKYN 484
           S Y ++ NNY + YN
Sbjct: 92  SNYNNYNNNYNNNYN 106



 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 531 NSYYGDFQNNYKDKY 487
           N+Y  ++ NNYK  Y
Sbjct: 103 NNYNNNYNNNYKKLY 117


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 537 DYNSYYGDFQNNYKDKY 487
           +YN+Y  ++ NNYK  Y
Sbjct: 336 NYNNYNNNYNNNYKKLY 352


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 537 DYNSYYGDFQNNYKDKY 487
           +YN+ Y ++ NNY   Y
Sbjct: 93  NYNNNYNNYNNNYNTNY 109


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 613 NRPNNAGFYPKXPYSEXI 666
           N+P N+GFY    YS  +
Sbjct: 290 NKPINSGFYSTIMYSNGV 307


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 613 NRPNNAGFYPKXPYSEXI 666
           N+P N+GFY    YS  +
Sbjct: 290 NKPINSGFYSTIMYSNGV 307


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 537 DYNSYYGDFQNNYKDKY 487
           +YN+Y  +  NNYK  Y
Sbjct: 337 NYNNYNNNNYNNYKKLY 353


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,838
Number of Sequences: 438
Number of extensions: 3450
Number of successful extensions: 23
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)