Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L18
         (942 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0439 + 3333654-3334217                                           31   1.0  
07_03_0558 + 19461369-19462448                                         29   4.1  
05_05_0173 + 22956927-22958615                                         29   5.4  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    29   7.1  
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886...    29   7.1  
01_05_0490 + 22672241-22674679                                         29   7.1  
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090...    28   9.4  
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155...    28   9.4  
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695...    28   9.4  
04_04_1027 - 30216859-30217212,30218769-30219178,30219395-30219800     28   9.4  

>07_01_0439 + 3333654-3334217
          Length = 187

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 15/43 (34%), Positives = 18/43 (41%)
 Frame = +1

Query: 778 PXSXGXXTPTGTIKXXRPFPPXKXPPRXPPXXPXPAAXPEXLS 906
           P S G   P G I+  RP P    PP  PP    P   P  ++
Sbjct: 11  PSSKGKRRPGGIIRGPRPQPLIVSPPPPPPPASRPPKKPRVVA 53


>07_03_0558 + 19461369-19462448
          Length = 359

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -2

Query: 893 GXAAGXGXXGGXRGGXFXGGNGL 825
           G   G G  GG  GG F GG GL
Sbjct: 65  GLGGGGGGLGGGHGGGFGGGGGL 87


>05_05_0173 + 22956927-22958615
          Length = 562

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = +1

Query: 802 PTGTIKXXRPFPPXKXPPRXPPXXPXPAAXPEXLSXL 912
           PT   +   P  P   PP  PP  P P A PE    L
Sbjct: 79  PTPLPEPYDPSAPEAHPPYVPPPVPPPEAIPELADDL 115


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 8/58 (13%)
 Frame = +1

Query: 772 DXPXSXGXXTPTGTIKXXRPFPPXKXPPR--------XPPXXPXPAAXPEXLSXLXXP 921
           D P      TPT T     P PP   PPR         PP  P P   P  +S    P
Sbjct: 55  DSPPPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISPTPAP 112


>03_05_1153 +
           30787574-30787608,30787982-30788089,30788651-30788689,
           30789181-30789184,30789496-30789580,30789609-30790321
          Length = 327

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 14/52 (26%), Positives = 18/52 (34%)
 Frame = +1

Query: 766 KXDXPXSXGXXTPTGTIKXXRPFPPXKXPPRXPPXXPXPAAXPEXLSXLXXP 921
           K + P +     P        P PP K PP  PP    P   P  +  +  P
Sbjct: 201 KPEPPPAVIIVEPPAPAPEPEPEPPKKEPPPPPPPKQEPCPPPPKVVEVPYP 252


>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 778 PXSXGXXTPTGTIKXXRPFPPXKXPPRXPPXXPXP 882
           P S    +P  T++   P P    PPR PP  P P
Sbjct: 582 PSSDASASPDSTVRTTNPAP---APPRRPPPPPPP 613


>09_06_0107 +
           20907560-20908491,20908511-20908625,20908967-20909058,
           20909293-20909556,20910714-20911494
          Length = 727

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +1

Query: 835 PPXKXPPRXPPXXPXPAAXPEXLS 906
           PP + PP  PP  P P   P  LS
Sbjct: 74  PPPQTPPSPPPPPPPPPPPPPPLS 97


>09_04_0487 -
           18014469-18014660,18014935-18015016,18015297-18015548,
           18015634-18017789
          Length = 893

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +1

Query: 790 GXXTPTGTIKXXRPFPPXKXPPRXPPXXPXPAAXPEXLSXLXXPS 924
           G  TP+       P PP    PR PP  P   + P   +    PS
Sbjct: 466 GSSTPSSAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPS 510


>08_02_0450 -
           17266977-17267165,17268017-17268053,17268139-17269514,
           17285369-17286055,17286146-17286343
          Length = 828

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +1

Query: 790 GXXTPTGTIKXXRPFPPXKXPPRXPPXXPXPAAXPEXLSXLXXPS 924
           G  TP+       P PP    PR PP  P   + P   +    PS
Sbjct: 512 GSSTPSSAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPS 556


>04_04_1027 - 30216859-30217212,30218769-30219178,30219395-30219800
          Length = 389

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +1

Query: 829 PFPPXKXPPRXPPXXPXPAAXPEXLSXLXXPSGKR 933
           P P    PP  PP  P PA  P  L  L    G R
Sbjct: 20  PAPAPVPPPPPPPPPPPPANVPRELEELVAGYGVR 54


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,852,634
Number of Sequences: 37544
Number of extensions: 147231
Number of successful extensions: 1289
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)