Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L17
(919 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 32 0.099
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 31 0.23
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 29 0.92
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 29 1.2
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 29 1.2
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 28 2.1
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.8
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 27 2.8
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 27 2.8
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 27 2.8
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 27 3.7
SPAC1556.06.2 |meu2|SPAC1556.06b, SPAC1556.06|sequence orphan|Sc... 27 3.7
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 3.7
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 3.7
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 6.5
SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 6.5
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 26 6.5
SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase ... 26 6.5
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 26 8.6
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 26 8.6
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 32.3 bits (70), Expect = 0.099
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Frame = +2
Query: 203 LKQLKETLSNQVXGQNKAINSIIHV--LNKEGTK-------LLFFYGSTGVGKTYTASII 355
L +++T+ ++ GQ++A+ +I L++ G + F G TGVGKT +
Sbjct: 493 LLNMEQTIGKKIIGQDEALKAIADAVRLSRAGLQNTNRPLASFLFLGPTGVGKTALTKAL 552
Query: 356 ME-LFGKKSNLYHYTMPSFEE 415
E LF + + M F+E
Sbjct: 553 AEFLFDTDKAMIRFDMSEFQE 573
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 230 NQVXGQNKAINSIIHVLNKEGTKLLFFYGSTGVGKTYT-ASIIMELFG 370
+QV Q + + L + FYGS G GKT T ++ ELFG
Sbjct: 31 DQVSSQESTVQVLKKTLLSNNLPHMLFYGSPGTGKTSTILALSRELFG 78
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 29.1 bits (62), Expect = 0.92
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = -3
Query: 914 ITNXATIHGHIWXXFYMIKIHCGTFLKQFNLCMTSFTPHLQQHQNSSEVFR 762
+T A I G++ + ++ H F + + ++ PHLQ+H+ S + F+
Sbjct: 669 MTWVAEIGGYLDDSYDELEQHHANFHNKAGISQSNIPPHLQEHRQSQQHFQ 719
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 302 LFFYGSTGVGKTYTAS 349
+F YG TG GKTYT S
Sbjct: 155 IFAYGQTGTGKTYTMS 170
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +2
Query: 263 SIIHVLNKEGTKLLFFYGSTGVGKTYTASIIMELFGKKSNLYHYTMPSFEEIFSTDFMYG 442
+I+ L+ G L+ G G GKT T I+ + YH T P+ ++ ST+
Sbjct: 1137 AIMCALDNNGFTLI--QGPPGTGKTKTIIGIISALLVDLSRYHITRPN-QQSKSTESKQQ 1193
Query: 443 LILCKSSLFIVD 478
++LC S VD
Sbjct: 1194 ILLCAPSNAAVD 1205
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 302 LFFYGSTGVGKTYTAS 349
+F YG TG GKTYT S
Sbjct: 571 IFAYGQTGSGKTYTMS 586
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/52 (25%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 449 LCKSSLFIVDGLSRNDKIVNQHVKDLIKKSQELDKNITII--LIYSCDNLNN 598
+CK +L +VD +Q V D ++++Q ++K+++ + +I++ N +N
Sbjct: 712 ICKGTLNLVDLAGSERLSYSQAVGDRLRETQAINKSLSCLGDVIHALGNASN 763
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 27.5 bits (58), Expect = 2.8
Identities = 21/51 (41%), Positives = 25/51 (49%)
Frame = -2
Query: 615 SHIFI*LFKLSQLYINIIVIFLSSSWLFFIRSFTCWFTILSFLLSPSTMKS 463
S F LF LSQ++I F +LFF F C LSFL S S + S
Sbjct: 130 SFSFSFLFFLSQIFIVYFSSFPILHFLFFF--FLCVCVFLSFLFSLSHLLS 178
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 251 KAINSIIHVLNKEGTKLLFFYGSTGVGKTYT 343
+++ S++ + ++F YG TG GKTY+
Sbjct: 197 RSVKSVVRNVFSGYNGIVFAYGMTGTGKTYS 227
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 27.5 bits (58), Expect = 2.8
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 227 SNQVXGQNKAINSIIHVLNK---EGTKLLFF-YGSTGVGKTYTASIIMELFGKKSNLYHY 394
S + GQ S +L K EG F YG G GKTY+ ++ L G+ + H
Sbjct: 74 SKNLSGQEDVYESTGPLLVKSILEGFNSCFITYGQKGTGKTYS---VVGLRGQPGIIPHI 130
Query: 395 TMPSFEEI 418
+ FEEI
Sbjct: 131 SESIFEEI 138
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 302 LFFYGSTGVGKTYTASIIME 361
+F YG+TG GKT+T S M+
Sbjct: 140 IFAYGATGCGKTHTISGTMQ 159
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 203 LKQLKETLSNQVXGQNKAINSIIH 274
LK L E V G+N+A+N I+H
Sbjct: 255 LKNLLEVKDKDVEGRNEALNKILH 278
>SPAC1556.06.2 |meu2|SPAC1556.06b, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 99
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +2
Query: 575 YSCDNLNNYMKMCDENFHIKVTEDFKDVNVHKAFVKFDLLNNLHLRQCIQK--EANSQNL 748
Y C++ +N ++ D +++ TE+ K N+ F+ NL L C + + S++L
Sbjct: 26 YFCEDQSNIYEVEDMRYYLFYTEEEK--NMLPGFIVNARPANLDLFPCCYETTDKRSKHL 83
Query: 749 KN-VDYEKLLKN 781
KN ++ +KL+K+
Sbjct: 84 KNMLNKKKLIKH 95
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +2
Query: 575 YSCDNLNNYMKMCDENFHIKVTEDFKDVNVHKAFVKFDLLNNLHLRQCIQK--EANSQNL 748
Y C++ +N ++ D +++ TE+ K N+ F+ NL L C + + S++L
Sbjct: 703 YFCEDQSNIYEVEDMRYYLFYTEEEK--NMLPGFIVNARPANLDLFPCCYETTDKRSKHL 760
Query: 749 KN-VDYEKLLKN 781
KN ++ +KL+K+
Sbjct: 761 KNMLNKKKLIKH 772
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 644 DFKDVNVHKAFVKFDLLNNLHLRQCIQKEANSQNLKNVDYEKLLKN 781
++ D VHK + DL + ++ E ++ ++KN EKLL+N
Sbjct: 309 NYSDAIVHKDKLIEDLSTRISEFDNLKSERDTLSIKNEKLEKLLRN 354
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 302 LFFYGSTGVGKTYTASIIMELFGKK 376
L G TG GKT T ++ L G+K
Sbjct: 470 LLLVGETGTGKTTTIQLLAGLLGQK 494
>SPCC16C4.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +2
Query: 485 SRNDKIVNQHVKDLIKKSQELDKNITII 568
S+ +++NQ + L+ + Q +DKNI I+
Sbjct: 197 SKVSRLINQGLTPLLSRLQLIDKNIKIV 224
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 302 LFFYGSTGVGKTYTAS 349
+F YG+TG GKT+T S
Sbjct: 130 VFAYGATGCGKTHTIS 145
>SPAC1805.01c |ppk6|SPAPJ736.02c|serine/threonine protein kinase
Ppk6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 545 LDKNITIILIYSCDNLNNYMKMCDENFHIKVTEDFKDVNVHKAFVKFDLLNNLHLR 712
LD + I S DN++ +M D N H ++T ++ H F L+ H+R
Sbjct: 717 LDAKLRIPFELSKDNVDLICRMLDRNVHDRIT--IEETLQHHWFDDIRYLDTSHIR 770
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 302 LFFYGSTGVGKTYTAS 349
+F YG TG GKT+T S
Sbjct: 559 IFAYGQTGSGKTHTMS 574
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 278 LNKEGTKLLFFYGSTGVGKTYTASIIMELFGKK 376
L GT L YG TG GKTYT I F K+
Sbjct: 74 LGYNGTVLA--YGQTGSGKTYTMMGIENNFEKE 104
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,336,701
Number of Sequences: 5004
Number of extensions: 67337
Number of successful extensions: 215
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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