Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L17
(919 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical... 34 0.16
U61955-4|AAC24407.1| 772|Caenorhabditis elegans Zygotic epiderm... 31 1.5
U61955-3|AAC24406.1| 775|Caenorhabditis elegans Zygotic epiderm... 31 1.5
U61955-2|AAM97993.1| 777|Caenorhabditis elegans Zygotic epiderm... 31 1.5
AF057568-1|AAC33438.1| 772|Caenorhabditis elegans kinesin-like ... 31 1.5
AF057567-1|AAC33437.1| 775|Caenorhabditis elegans kinesin-like ... 31 1.5
Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical pr... 30 2.7
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 30 2.7
AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical... 30 2.7
Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 29 3.5
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 29 3.5
AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical ... 29 3.5
AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein. 29 3.5
AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like ... 29 3.5
Z92782-10|CAE17812.1| 377|Caenorhabditis elegans Hypothetical p... 29 4.7
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 29 4.7
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 29 4.7
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 29 6.2
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 28 8.1
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 28 8.1
>AL023835-12|CAA19484.1| 412|Caenorhabditis elegans Hypothetical
protein Y37A1B.13 protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = +2
Query: 164 LIYSKFKCSDXLXLKQLKETLSNQVXGQNKAINSIIHVL-----NKEGTK--LLFFYGST 322
L Y+ +D L + N++ GQ+ S++H + N+ K +L F+G T
Sbjct: 108 LFYTCCGETDIFNYHALYKDFDNKIFGQHLMAESVVHSIKSHWHNEHSQKPLVLSFHGGT 167
Query: 323 GVGKTYTASIIM 358
G GK Y II+
Sbjct: 168 GTGKNYVTEIIV 179
>U61955-4|AAC24407.1| 772|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform b protein.
Length = 772
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 245 QNKAINSIIHVLNKEGTKLLFFYGSTGVGKTYT 343
+ +++ I+++L + + LLF YG TG GKTYT
Sbjct: 90 ERTSVDLILNLLKGQNS-LLFTYGVTGSGKTYT 121
>U61955-3|AAC24406.1| 775|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform a protein.
Length = 775
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 245 QNKAINSIIHVLNKEGTKLLFFYGSTGVGKTYT 343
+ +++ I+++L + + LLF YG TG GKTYT
Sbjct: 90 ERTSVDLILNLLKGQNS-LLFTYGVTGSGKTYT 121
>U61955-2|AAM97993.1| 777|Caenorhabditis elegans Zygotic epidermal
enclosure defectiveprotein 4, isoform c protein.
Length = 777
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 245 QNKAINSIIHVLNKEGTKLLFFYGSTGVGKTYT 343
+ +++ I+++L + + LLF YG TG GKTYT
Sbjct: 90 ERTSVDLILNLLKGQNS-LLFTYGVTGSGKTYT 121
>AF057568-1|AAC33438.1| 772|Caenorhabditis elegans kinesin-like
protein ZEN-4b protein.
Length = 772
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 245 QNKAINSIIHVLNKEGTKLLFFYGSTGVGKTYT 343
+ +++ I+++L + + LLF YG TG GKTYT
Sbjct: 90 ERTSVDLILNLLKGQNS-LLFTYGVTGSGKTYT 121
>AF057567-1|AAC33437.1| 775|Caenorhabditis elegans kinesin-like
protein ZEN-4a protein.
Length = 775
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 245 QNKAINSIIHVLNKEGTKLLFFYGSTGVGKTYT 343
+ +++ I+++L + + LLF YG TG GKTYT
Sbjct: 90 ERTSVDLILNLLKGQNS-LLFTYGVTGSGKTYT 121
>Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 617 ENFHIKVTEDFKDVNVHKAFVKFDLLNNLHLRQCIQKEANSQNLKNVDYEKLLKN 781
E + KV+ED KD K NNL +++C +K+ N + K +E L+++
Sbjct: 168 ERKYEKVSEDQKDEKYSSKREK----NNLAVKRCREKKKNEEKYKKEAFENLIRS 218
>Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 617 ENFHIKVTEDFKDVNVHKAFVKFDLLNNLHLRQCIQKEANSQNLKNVDYEKLLKN 781
E + KV+ED KD K NNL +++C +K+ N + K +E L+++
Sbjct: 168 ERKYEKVSEDQKDEKYSSKREK----NNLAVKRCREKKKNEEKYKKEAFENLIRS 218
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 671 AFVKFDLLNNLHLRQCIQKEANSQNLKNVDYEKLLKNFD 787
A +++ NN HL++C +E ++LKN + E++LKN++
Sbjct: 980 AMLRYSRANNRHLKKCNTEE---ESLKNYE-EEILKNYE 1014
>AL023835-11|CAA19495.1| 335|Caenorhabditis elegans Hypothetical
protein Y37A1B.12 protein.
Length = 335
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +2
Query: 179 FKCSDXLXLKQLKETLSNQVXGQNKAINSII-----HVLNKEGTK--LLFFYGSTGVGKT 337
F CS L +L LS + GQ+ I++++ H N+ K +L F+G G GK
Sbjct: 37 FLCSTENGL-ELHRDLSRFIYGQHLVIDTVVRSIKSHWHNEHPQKPLVLSFHGGPGTGKN 95
Query: 338 YTASII 355
Y II
Sbjct: 96 YVTEII 101
>Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical
protein K11D9.1b protein.
Length = 689
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 266 IIHVLNKEGTKLLFFYGSTGVGKTYTASIIMELFGKKSN 382
++ + GT F YG TG GKT+T + GKK N
Sbjct: 336 LVKTVFDNGTATCFAYGQTGSGKTHTMG--GDFSGKKQN 372
>Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical
protein K11D9.1a protein.
Length = 747
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 266 IIHVLNKEGTKLLFFYGSTGVGKTYTASIIMELFGKKSN 382
++ + GT F YG TG GKT+T + GKK N
Sbjct: 394 LVKTVFDNGTATCFAYGQTGSGKTHTMG--GDFSGKKQN 430
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 578 SCDNLNNYMKMCDENFHIKVTEDFKDVNVHKAFVKFDLLNNLHLRQCIQKEANSQNLKNV 757
S + LN + D + + D + KAF +FD LNN+ ++ + + K
Sbjct: 182 SSERLNGRKEKSDSDSDDGHDDAALDADASKAFEEFDFLNNMDAKE--KGSDDDWAGKGA 239
Query: 758 DYEKLLKNF 784
+EKL+K +
Sbjct: 240 SFEKLIKQY 248
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 578 SCDNLNNYMKMCDENFHIKVTEDFKDVNVHKAFVKFDLLNNLHLRQCIQKEANSQNLKNV 757
S + LN + D + + D + KAF +FD LNN+ ++ + + K
Sbjct: 182 SSERLNGRKEKSDSDSDDGHDDAALDADASKAFEEFDFLNNMDAKE--KGSDDDWAGKGA 239
Query: 758 DYEKLLKNF 784
+EKL+K +
Sbjct: 240 SFEKLIKQY 248
>AF024502-7|AAB70377.3| 352|Caenorhabditis elegans Hypothetical
protein M151.6 protein.
Length = 352
Score = 29.5 bits (63), Expect = 3.5
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Frame = +2
Query: 413 EIFSTDF-MYGLILCKSSLFIVDGLSRNDKIVNQHVKDLIKKSQ----ELDKNITIILIY 577
E+ ST+ + G + K I+D SRN K V ++++ ++ EL K I I+ ++
Sbjct: 145 EMESTELNVPGFTIKKWIEHIIDVFSRN-KDVQLNIRNAQGRNATEILELLKQINIVTLH 203
Query: 578 S--CDNLNNYMKMCDENFHIKVTEDFKDVNVHKAFVKFD-----LLNNLHLRQCIQKEAN 736
S + NN+MKM + V + +++ +K+ LNN+ + C Q
Sbjct: 204 SELFEIPNNFMKMFPSIETLGVFTESMPASIYIQNLKWVRGSNVTLNNILISNCSQFFTK 263
Query: 737 SQNLKNVDYEKLLKNF 784
+ D+ LLKN+
Sbjct: 264 DSQFSSKDFNLLLKNW 279
>AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein.
Length = 747
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 266 IIHVLNKEGTKLLFFYGSTGVGKTYTASIIMELFGKKSN 382
++ + GT F YG TG GKT+T + GKK N
Sbjct: 394 LVKTVFDNGTATCFAYGQTGSGKTHTMG--GDFSGKKQN 430
>AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like
protein (klp-7) protein.
Length = 689
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 266 IIHVLNKEGTKLLFFYGSTGVGKTYTASIIMELFGKKSN 382
++ + GT F YG TG GKT+T + GKK N
Sbjct: 336 LVKTVFDNGTATCFAYGQTGSGKTHTMG--GDFSGKKQN 372
>Z92782-10|CAE17812.1| 377|Caenorhabditis elegans Hypothetical
protein F14F8.10 protein.
Length = 377
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 579 LYINIIVIFLSSSWLFFIRSFTCWFTILSFL 487
LYI ++F+S+ F I + +FT+LS L
Sbjct: 303 LYIGKYIVFMSAGLSFIIEKLSMFFTLLSIL 333
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 227 SNQVXGQNKAINSIIHVLNKEGTKLLFFYGSTGVGKTYT 343
++Q+ N A I+ + K +F YG TG GKT+T
Sbjct: 60 TDQMTVYNVAARPIVENVLKGYNGTIFAYGQTGTGKTFT 98
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 227 SNQVXGQNKAINSIIHVLNKEGTKLLFFYGSTGVGKTYT 343
++Q+ N A I+ + K +F YG TG GKT+T
Sbjct: 62 TDQMTVYNVAARPIVENVLKGYNGTIFAYGQTGTGKTFT 100
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/94 (22%), Positives = 45/94 (47%)
Frame = +2
Query: 515 VKDLIKKSQELDKNITIILIYSCDNLNNYMKMCDENFHIKVTEDFKDVNVHKAFVKFDLL 694
++ LI++ +I +++ N ++C E + +T +D+ ++K + L+
Sbjct: 530 LETLIRELTPEKTSIAATMVWCIQNAKYAAEIC-ECVYDSLT--IEDIPLYKKISRLYLI 586
Query: 695 NNLHLRQCIQKEANSQNLKNVDYEKLLKNFDVAV 796
N++ L C+Q+ L +E LL+ VAV
Sbjct: 587 NDI-LSNCVQRNVRDVFLYRSHFEALLEKIFVAV 619
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 563 IILIYSCDNLNNYMKMCDENFHIKVTEDFKDVN 661
I+ + CD L+N++ MC + EDF +VN
Sbjct: 6 ILTLGECDELDNHIVMCSTGL-LSPQEDFSNVN 37
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 563 IILIYSCDNLNNYMKMCDENFHIKVTEDFKDVN 661
I+ + CD L+N++ MC + EDF +VN
Sbjct: 6 ILTLGECDELDNHIVMCSTGL-LSPQEDFSNVN 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,062,265
Number of Sequences: 27780
Number of extensions: 363254
Number of successful extensions: 1171
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -