Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L17
         (919 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   5.1  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   6.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   6.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   9.0  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 360 NCLEKNLIYTTIRCLV-LKKFSPQTSCM 440
           NCL ++ I T  RCL+ L+K   + +C+
Sbjct: 425 NCLRESFIGTLQRCLLSLEKTYERDTCL 452


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 360 NCLEKNLIYTTIRCLV-LKKFSPQTSCM 440
           NCL ++ I T  RCL+ L+K   + +C+
Sbjct: 463 NCLRESFIGTLQRCLLSLEKTYERDTCL 490


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 20/95 (21%), Positives = 39/95 (41%)
 Frame = +2

Query: 269 IHVLNKEGTKLLFFYGSTGVGKTYTASIIMELFGKKSNLYHYTMPSFEEIFSTDFMYGLI 448
           I ++NK+    LF+Y    +   Y    +    G+     ++  P  E  F    +  L+
Sbjct: 222 IRIVNKDRRGELFYYMHQQIMARYNCERLCNRLGRVKRFINWHEPIPEAYFPK--LDSLV 279

Query: 449 LCKSSLFIVDGLSRNDKIVNQHVKDLIKKSQELDK 553
             ++  F   G    D  +N+ V +L    Q+L++
Sbjct: 280 ASRTWPFRPSGTVLKD--INRQVDELNFDIQDLER 312


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 737 CLPPFVYIVSNVSYLTNQI*QMPYV 663
           CL P+VY +S+  Y      ++P++
Sbjct: 322 CLDPYVYAISHPKYRLELQKRLPWL 346


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 485 SRNDKIVNQHVKDLIKKSQELDKNITIILIYSCDNLNNYMKM 610
           SR  KI++      I  +   + N      Y+ +N NNY K+
Sbjct: 76  SREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYKKL 117


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 269 IHVLNKEGTKLLF--FYGSTGVGKTYTASIIMELFGKKSNLYHYTMPSFEEI 418
           I++   E   +L+    G T +  TY+AS ++++  +    +      FE++
Sbjct: 264 IYMSRHENVSILYADIVGFTAISSTYSASELVKILNELFARFDQLSERFEQL 315


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 32  PSFXLFKPMQTFHILQTQPQLHQIT 106
           PS   F P+   H+   QP+ + I+
Sbjct: 878 PSVRPFAPLLLLHLTPLQPRFYSIS 902


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,863
Number of Sequences: 438
Number of extensions: 4330
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)