Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L16
         (950 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase prote...    36   0.032
AF026152-1|AAB81847.1|  117|Caenorhabditis elegans chitinase pro...    33   0.30 
AL031630-9|CAA20988.1|  345|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z47075-6|CAA87379.1|  538|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AF500111-1|AAM27196.1|  538|Caenorhabditis elegans poly ADP-ribo...    30   2.1  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>U42835-2|AAA83586.1|  617|Caenorhabditis elegans Chitinase protein
           1 protein.
          Length = 617

 Score = 36.3 bits (80), Expect = 0.032
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +3

Query: 513 AGIAAARTAFINSGVLLG*TYGFDGIDLPWXVP 611
           A  +A+R  FI+S +    T+GFDGID+ W  P
Sbjct: 149 AASSASRKVFIDSAITFVRTWGFDGIDIDWEYP 181


>AF026152-1|AAB81847.1|  117|Caenorhabditis elegans chitinase
           protein.
          Length = 117

 Score = 33.1 bits (72), Expect = 0.30
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +3

Query: 513 AGIAAARTAFINSGVLLG*TYGFDGIDLPW 602
           A  +A+R  FI+S      T+GFDGIDL W
Sbjct: 88  AASSASRKVFIDSATTSVRTWGFDGIDLDW 117


>AL031630-9|CAA20988.1|  345|Caenorhabditis elegans Hypothetical
           protein Y38H6C.10 protein.
          Length = 345

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -1

Query: 641 VERIFLGLTLGNXPGEVNSIETICSAQQHSGINESSTGCCDSSR 510
           +E+I +G   G    E+ + E   + +Q+  I E+  GCCD+ +
Sbjct: 189 LEKIAVGRISGKDYAEIKNTEQFKACKQYMLIAETGPGCCDAEK 232


>Z47075-6|CAA87379.1|  538|Caenorhabditis elegans Hypothetical
           protein E02H1.4 protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 861 IVN*VNDGGHXVXXCRINVGQNSHXELHLRLVDKG 757
           I+N  N  G+ V  C+ N+ QN++    + L+D+G
Sbjct: 3   IINDENGRGYKVHLCKTNIAQNNNKFYDMELLDEG 37


>AF500111-1|AAM27196.1|  538|Caenorhabditis elegans poly ADP-ribose
           metabolism enzyme-2 protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 861 IVN*VNDGGHXVXXCRINVGQNSHXELHLRLVDKG 757
           I+N  N  G+ V  C+ N+ QN++    + L+D+G
Sbjct: 3   IINDENGRGYKVHLCKTNIAQNNNKFYDMELLDEG 37


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = -1

Query: 602 PGEVNSIETICSAQQHSGINESSTGCCDSSRRLYFSGSSVSASPT 468
           P    S +T C  Q    + + ST C DS R         SA PT
Sbjct: 742 PACTQSCQTSCVQQNSQSVPQCSTACTDSCRSSCVEIVKESAEPT 786


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,759,770
Number of Sequences: 27780
Number of extensions: 438193
Number of successful extensions: 858
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)