Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L14
(856 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 211 2e-53
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 210 4e-53
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 205 1e-51
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 162 1e-38
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 159 1e-37
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 155 2e-36
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 151 2e-35
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 147 3e-34
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 138 2e-31
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 137 3e-31
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 122 2e-26
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 107 5e-22
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 92 2e-17
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 88 3e-16
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 82 2e-14
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 81 3e-14
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 73 7e-12
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 63 7e-09
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 63 7e-09
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 59 2e-07
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 57 5e-07
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 57 5e-07
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 6e-06
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 50 7e-05
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 50 7e-05
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.32
UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3; Bacteri... 37 0.56
UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3; ... 36 1.3
UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellu... 34 4.0
UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4; Sophophora|... 34 5.3
UniRef50_Q4T2R9 Cluster: Chromosome undetermined SCAF10201, whol... 33 6.9
UniRef50_Q0V4M2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 211 bits (515), Expect = 2e-53
Identities = 106/151 (70%), Positives = 123/151 (81%), Gaps = 6/151 (3%)
Frame = +3
Query: 213 CVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPS 392
C GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI VVPS
Sbjct: 17 CTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPS 76
Query: 393 AAALIIRALKEPPRDRKKQKNIKHNGNI------SLGRCSRHCEDHEKQINGPVPFWAQ* 554
A+ALII+ALKEPPRDRKKQKNIKH+GNI ++ R RH ++++G +
Sbjct: 77 ASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRH-RSLARELSGTI------ 129
Query: 555 KRFLGTAQSVGCTVEGRPPHDLIDDINSGAL 647
K LGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 130 KEILGTAQSVGCNVDGRHPHDIIDDINSGAV 160
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 164 MPPKFDPNEIKIVNLRMCRRG 226
MPPKFDPNEIK+V LR C G
Sbjct: 1 MPPKFDPNEIKVVYLR-CTGG 20
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 210 bits (512), Expect = 4e-53
Identities = 106/151 (70%), Positives = 123/151 (81%), Gaps = 6/151 (3%)
Frame = +3
Query: 213 CVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPS 392
C GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI VVPS
Sbjct: 49 CTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPS 108
Query: 393 AAALIIRALKEPPRDRKKQKNIKHNGNI------SLGRCSRHCEDHEKQINGPVPFWAQ* 554
A+ALII+ALKEPPRDRKKQKNIKH+GNI ++ R RH ++++G +
Sbjct: 109 ASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIVRQMRH-RSLARELSGTI------ 161
Query: 555 KRFLGTAQSVGCTVEGRPPHDLIDDINSGAL 647
K LGTAQSVGC V+GR PHD+IDDINSGA+
Sbjct: 162 KEILGTAQSVGCNVDGRHPHDIIDDINSGAV 192
Score = 35.5 bits (78), Expect = 1.7
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 164 MPPKFDPNEIKIVNLRMCRRG 226
MPPKFDPNEIK+V LR C G
Sbjct: 33 MPPKFDPNEIKVVYLR-CTGG 52
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 205 bits (501), Expect = 1e-51
Identities = 106/171 (61%), Positives = 127/171 (74%), Gaps = 6/171 (3%)
Frame = +3
Query: 159 TKCPLSLTQMKLKS*ICECVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI 338
T P ++K CVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKI
Sbjct: 141 TAMPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKI 200
Query: 339 TVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNI------SLGRCSRH 500
TV LT+QNRQA I+VVPSAA+LII+ALKEPPRDRKKQKNIKH+GNI ++ R R
Sbjct: 201 TVCLTIQNRQAAISVVPSAASLIIKALKEPPRDRKKQKNIKHSGNIGFEDILAIARVMRP 260
Query: 501 CEDHEKQINGPVPFWAQ*KRFLGTAQSVGCTVEGRPPHDLIDDINSGALTI 653
+++ G K LGTAQSVGCTV+G+ PHD+ID++N G++ +
Sbjct: 261 -RSMARELKGTC------KEVLGTAQSVGCTVDGKHPHDVIDELNEGSIEV 304
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 162 bits (393), Expect = 1e-38
Identities = 77/148 (52%), Positives = 106/148 (71%)
Frame = +3
Query: 216 VGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSA 395
VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I VVP++
Sbjct: 30 VGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIEVVPTS 89
Query: 396 AALIIRALKEPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFLGTA 575
A+++++ L E PRDRKK KNIKHNGN+ + + K+ + F K LGT
Sbjct: 90 ASMVLKELNEAPRDRKKVKNIKHNGNLKIEQVYSIAR-AMKEKSRAKEFRGTVKEILGTC 148
Query: 576 QSVGCTVEGRPPHDLIDDINSGALTIDE 659
S+GCTV+G+ P + + I++G + + +
Sbjct: 149 NSIGCTVDGKKPTTIQEMIDNGDIDVPD 176
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 159 bits (385), Expect = 1e-37
Identities = 76/150 (50%), Positives = 101/150 (67%)
Frame = +3
Query: 204 ICECVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAV 383
+ VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T QL V+NR A + V
Sbjct: 69 VVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVTCQLRVKNRVATVIV 128
Query: 384 VPSAAALIIRALKEPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRF 563
PS A+ +IRALKEPPRDRKK KNIKH+GNI+ + ++ G +
Sbjct: 129 TPSVASRLIRALKEPPRDRKKVKNIKHDGNIAFSEILKIAKESAPNSMG-ASMKSVVMEV 187
Query: 564 LGTAQSVGCTVEGRPPHDLIDDINSGALTI 653
LGTA S+GCT++G P + + + G L +
Sbjct: 188 LGTAVSIGCTIDGEHPRAIQEKVQEGKLKV 217
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 155 bits (375), Expect = 2e-36
Identities = 72/81 (88%), Positives = 78/81 (96%)
Frame = +3
Query: 213 CVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPS 392
C GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI VVPS
Sbjct: 110 CTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIEVVPS 169
Query: 393 AAALIIRALKEPPRDRKKQKN 455
A+ALII+ALKEPPRDRKKQKN
Sbjct: 170 ASALIIKALKEPPRDRKKQKN 190
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 151 bits (367), Expect = 2e-35
Identities = 88/174 (50%), Positives = 111/174 (63%), Gaps = 29/174 (16%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW------------------------K 326
GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW K
Sbjct: 19 GGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGCCDARKEQWLTWTVSAVQK 78
Query: 327 GLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLG---RCSR 497
GL++TV+LT+QNRQA ++VVPSA++L+I+ALKEPPRDRKK+KNIKHN +I L +R
Sbjct: 79 GLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEKNIKHNKSIPLDDIIEIAR 138
Query: 498 HCEDHE--KQINGPVPFWAQ*KRFLGTAQSVGCTVEGRPPHDLIDDINSGALTI 653
K++ G V LGTA SVGC V+GR P D+ DD+ +G + I
Sbjct: 139 TMRSRSLAKELKGTV------LEILGTAFSVGCQVDGRSPKDVSDDVKAGEIDI 186
Score = 35.9 bits (79), Expect = 1.3
Identities = 12/17 (70%), Positives = 17/17 (100%)
Frame = +2
Query: 164 MPPKFDPNEIKIVNLRM 214
MPPKFDPNE+K+++LR+
Sbjct: 1 MPPKFDPNEVKVIHLRV 17
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 147 bits (357), Expect = 3e-34
Identities = 82/132 (62%), Positives = 98/132 (74%), Gaps = 7/132 (5%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKITVQLTVQNRQAQIAVVPSA 395
GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++TV+LTVQNRQA+++VVP+A
Sbjct: 81 GGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPTA 140
Query: 396 AALIIRALKEPPRDRKKQKNIKHNGNISL------GRCSRHCEDHEKQINGPVPFWAQ*K 557
+AL+I+ALKEP +DRKK K I H GN SL R R + K + G V K
Sbjct: 141 SALVIKALKEPFQDRKKVKGITHTGNCSLDDIIEVARVMRP-KSCAKNLAGTV------K 193
Query: 558 RFLGTAQSVGCT 593
LGTA+SVGCT
Sbjct: 194 EILGTAKSVGCT 205
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 138 bits (334), Expect = 2e-31
Identities = 67/147 (45%), Positives = 98/147 (66%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAA 398
GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V L QNR A + V+P+++
Sbjct: 19 GGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMVNLRCQNRNADVTVIPTSS 78
Query: 399 ALIIRALKEPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFLGTAQ 578
AL+I+ + RDRKK KN+KHNGN++L + + E++ F K+ LGTAQ
Sbjct: 79 ALLIKEIGGYERDRKKTKNVKHNGNLTLEQVIKVARAVEEKSLAKT-FTGTVKQVLGTAQ 137
Query: 579 SVGCTVEGRPPHDLIDDINSGALTIDE 659
S+G TV+G+P +I INSG L +++
Sbjct: 138 SLGATVDGQPVKAIIGKINSGELKVEK 164
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 137 bits (332), Expect = 3e-31
Identities = 72/157 (45%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Frame = +3
Query: 210 ECVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVV 386
+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +++R+A + V
Sbjct: 17 QVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAIKDRKATVEVQ 74
Query: 387 PSAAALIIRALKEPPRDRKKQKNIKHNGN------ISLGRCSRHCEDHEKQINGPVPFWA 548
PS A LII++LKEPPRDRKK+KNI HNG+ + + R +R + ++G V
Sbjct: 75 PSVATLIIKSLKEPPRDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSNSLSGTV---- 130
Query: 549 Q*KRFLGTAQSVGCTVEGRPPHDLIDDINSGALTIDE 659
K LGT +S+GC V+G+ P ++ +I++G + + +
Sbjct: 131 --KEVLGTCKSIGCKVDGKCPKEVTREIDAGEIKLPD 165
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 122 bits (293), Expect = 2e-26
Identities = 78/151 (51%), Positives = 94/151 (62%), Gaps = 6/151 (3%)
Frame = +3
Query: 213 CVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPS 392
C G EV A S+LAPKI PLGLSPK KG QAQI VVPS
Sbjct: 145 CTGDEVSAMSALAPKISPLGLSPK-------------KG------------QAQIEVVPS 179
Query: 393 AAALIIRALKEPPRDRKKQKNIKHNGNI------SLGRCSRHCEDHEKQINGPVPFWAQ* 554
A+ALII+ALKEP RDRKKQKNIKH+GNI ++ R RH +++++G +
Sbjct: 180 ASALIIKALKEPARDRKKQKNIKHSGNITSDEIVNIARQMRH-RSLDRELSGTI------ 232
Query: 555 KRFLGTAQSVGCTVEGRPPHDLIDDINSGAL 647
K LGTAQS+GC V+GR PH +IDDINSGA+
Sbjct: 233 KELLGTAQSLGCNVDGRHPHKIIDDINSGAV 263
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 107 bits (256), Expect = 5e-22
Identities = 53/87 (60%), Positives = 60/87 (68%)
Frame = -1
Query: 475 MLPLCLIFFCFLRSRGGSLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMS 296
MLPLCL F F S GGS +A+M + A+GTT ACLF + TV L P SLVALA+S
Sbjct: 1 MLPLCLTFLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAIS 60
Query: 295 SPTFLGDRPRGPILGAKDDVAPTSPPT 215
SPTF GD+P GPI GAK APTSPPT
Sbjct: 61 SPTFFGDKPNGPIFGAKAAEAPTSPPT 87
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 91.9 bits (218), Expect = 2e-17
Identities = 50/151 (33%), Positives = 87/151 (57%), Gaps = 4/151 (2%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAA 398
GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V++ +NRQ ++VVP+A+
Sbjct: 19 GGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKVRIVSKNRQPTVSVVPTAS 78
Query: 399 ALIIRALKEPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFLGTAQ 578
+L+++AL E PR K + + H G + ++ + + + LG+A+
Sbjct: 79 SLLVKALGEGPRTIPKGQPLLHTGTVKFDTVLDIAKELRAN-SFALKYAGTVLEVLGSAR 137
Query: 579 SVGCTVEGR----PPHDLIDDINSGALTIDE 659
SVGC VE + P ++ + + +G + I E
Sbjct: 138 SVGCKVEYKGTVYSPAEITEMVKAGDIEIPE 168
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 87.8 bits (208), Expect = 3e-16
Identities = 47/84 (55%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Frame = +3
Query: 414 ALKEPPRDRKKQKNIKHNGNIS------LGRCSRHCEDHEKQINGPVPFWAQ*KRFLGTA 575
A KEPPRDRKKQKNIKH+GNI+ + R RH ++++G + K LGTA
Sbjct: 174 AKKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRH-RSLARELSGTI------KEILGTA 226
Query: 576 QSVGCTVEGRPPHDLIDDINSGAL 647
QSVGC V+GR PHD+IDDINSGA+
Sbjct: 227 QSVGCNVDGRHPHDIIDDINSGAV 250
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 81.8 bits (193), Expect = 2e-14
Identities = 44/87 (50%), Positives = 57/87 (65%)
Frame = -3
Query: 482 KGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLG 303
KGDV+ V +FLL +V+ L+G DD+G R + L LSVL+ Q HSD +TLP+T LG
Sbjct: 44 KGDVSTVLYVFLLLSVSWWFLEGFDDQGRGRRYHLNLSLSVLDRQFHSDPQTLPITSCLG 103
Query: 302 NVITHLFRRQTKRTDFRGQR*CGTDFP 222
+VI HLF RQT+ + GQ GTD P
Sbjct: 104 DVIAHLFWRQTQGANLGGQGRRGTDVP 130
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 81.0 bits (191), Expect = 3e-14
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = +3
Query: 216 VGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 353
VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 39 VGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 73.3 bits (172), Expect = 7e-12
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDWKGLKITVQLTVQNRQAQIAVVPSA 395
GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A + +VPS
Sbjct: 15 GGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNAYLKIVPSV 74
Query: 396 AALIIRALK 422
++L+ R ++
Sbjct: 75 SSLLKREMQ 83
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 63.3 bits (147), Expect = 7e-09
Identities = 43/150 (28%), Positives = 78/150 (52%)
Frame = -3
Query: 662 LFINGQSSAVDVINKIMWRPALHSTSN*LCCAQESLLLSPERYRAIDLFLMIFAMPTTSS 483
+F N ++VD + ++W +++T++ L Q+ L + LF + +
Sbjct: 16 VFWNFNFTSVDSFDDVVWVLVVNTTTDGLSSTQD-FLGDRSQVLTERLFSHLLSNFDDVF 74
Query: 482 KGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLG 303
+ V VFD+ +L +V+ L+ D++ NN LSVL+ QL+S+L+TL + GLG
Sbjct: 75 QLQVTTVFDVLVLLSVSWWFLQSGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGLG 134
Query: 302 NVITHLFRRQTKRTDFRGQR*CGTDFPADT 213
++ T+L QT+ T+ Q T+F D+
Sbjct: 135 DIFTNLLWGQTQWTNLWSQSSGSTNFTTDS 164
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 63.3 bits (147), Expect = 7e-09
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKI--TVQLTVQNRQAQIAV-VP 389
GG L P + LGL+ ++V I T+ +KG+ + T+++ ++ I V VP
Sbjct: 12 GGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKKYDIKVGVP 71
Query: 390 SAAALIIRALK-EPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFL 566
+ +L+++A+ + P K I GN+ L + + + Q++ A K L
Sbjct: 72 TTTSLLLKAINAQEPSGDPAHKKI---GNLDLEQIADIAIKKKPQLSAKT-LTAAIKSLL 127
Query: 567 GTAQSVGCTVEGRPPHDLIDDINSG 641
GTA+S+G TVEG+ P D+I +I+ G
Sbjct: 128 GTARSIGITVEGKDPKDVIKEIDQG 152
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 58.8 bits (136), Expect = 2e-07
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Frame = +3
Query: 441 KKQKNIKHNGNISLGRC------SRHCEDHEKQINGPVPFWAQ*KRFLGTAQSVGCTVEG 602
K QK+IKH+G+IS RH ++++G + K LGT+QSVGC V+G
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRH-RSLARELSGTI------KEILGTSQSVGCNVDG 122
Query: 603 RPPHDLIDDINSGAL 647
PHD+IDDINSGA+
Sbjct: 123 CHPHDIIDDINSGAV 137
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 57.2 bits (132), Expect = 5e-07
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = +3
Query: 453 NIKHNGNISLGRCSRHCE-----DHEKQINGPVPFWAQ*KRFLGTAQSVGCTVEGRPPHD 617
++KHNGNI+L + + + ++G V K LGT QSVGCTV+G PHD
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTV------KEILGTCQSVGCTVDGMAPHD 120
Query: 618 LIDDINSGALTIDE 659
+ID INSG + I++
Sbjct: 121 VIDKINSGEIEIED 134
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3
Query: 213 CVGGEVGATSSLAPKIGPLGL 275
C GGEVGAT+SLAPKIGPLGL
Sbjct: 17 CTGGEVGATASLAPKIGPLGL 37
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 57.2 bits (132), Expect = 5e-07
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQAQIAV-VP 389
GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+ +I V +P
Sbjct: 12 GGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRKFEIEVGIP 71
Query: 390 SAAALIIRALKEPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFLG 569
ALI + L + + + GN++L + + + +K K LG
Sbjct: 72 PTTALIKKELGIETAAHEPRHEVV--GNLTLEQVIKIAK-MKKDAMLSYTLKNAVKEVLG 128
Query: 570 TAQSVGCTVEGRPPHDLIDDINSG 641
T S+G TVEG+ P ++ +I++G
Sbjct: 129 TCGSMGVTVEGKDPKEVQKEIDAG 152
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 6e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -2
Query: 327 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 226
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 50.0 bits (114), Expect = 7e-05
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 386
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 387 PSAAALIIRALKEPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFL 566
P +AL+ + L KK++ + GN +L + + + L
Sbjct: 71 PPTSALLKKELGLEKGASKKKEAVA--GNATLEQIKNVAIKKMPSMLAK-DLKSAVLEVL 127
Query: 567 GTAQSVGCTVEGRPPHDLIDDINSGALTIDE 659
GT ++G VEG+ P ++ I SG + I++
Sbjct: 128 GTCVAMGINVEGKDPKEVQKLIKSGQIKIEQ 158
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 50.0 bits (114), Expect = 7e-05
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQAQIAV-VP 389
GG+ A L P IGPLG++ +V I T D++G+ + V++ V R ++ V +P
Sbjct: 12 GGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRTFEVEVGIP 71
Query: 390 SAAALIIRALKEPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFLG 569
A+ALI + + ++ + + GNI++ + + + + + A K +G
Sbjct: 72 PASALIKKEIGIEKGSQEPKHQVA--GNITMEQIVKIAKMKQDAMLAYNLKNAS-KEVVG 128
Query: 570 TAQSVGCTVEGRPPHDLIDDINSG 641
T SVG +VEG P + I++G
Sbjct: 129 TCVSVGISVEGMTPSEAQKAIDAG 152
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 37.9 bits (84), Expect = 0.32
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = -3
Query: 527 IDLFLMIFAMPTTSSKGDVAVVFDIFLLFTVTGRLLKGSDDKGCCRGNNSYLGLSVLNCQ 348
+++ I P ++++ + +F LF T + + +D C G S++ L +++
Sbjct: 271 VEVLGFILQRPVHKLVKELSLYYKLFTLFKTTPKSEEKTDTMDCINGIRSFMMLQIISHH 330
Query: 347 LHSDLETLPVT 315
+HS + T+P T
Sbjct: 331 VHSAIRTIPTT 341
>UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3;
Bacteria|Rep: 50S ribosomal protein L11 - Salinibacter
ruber (strain DSM 13855)
Length = 146
Score = 37.1 bits (82), Expect = 0.56
Identities = 29/133 (21%), Positives = 52/133 (39%)
Frame = +3
Query: 219 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAA 398
GG+ + P +G G++ + T D G + V++TV ++ +V S
Sbjct: 15 GGQANPAPPIGPALGQHGVNIMEFCKAFNSRTEDRMGTLLPVEITVYADRSFDFIVKSPP 74
Query: 399 ALIIRALKEPPRDRKKQKNIKHNGNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFLGTAQ 578
A ++ K G ++ C + + +N GTA+
Sbjct: 75 ASVLLKQKADIETAAGDPLRDDAGTVTWDDCLDIADQKLQDLNAHTVEKGA-SMVAGTAR 133
Query: 579 SVGCTVEGRPPHD 617
S+G TVEG+P H+
Sbjct: 134 SMGITVEGKPAHE 146
>UniRef50_A3B9H4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 260
Score = 35.9 bits (79), Expect = 1.3
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Frame = +3
Query: 213 CVGGEVGATSSLAPKIGPLGL-----SPKKVGDD-----IAKATSDWKGLKITVQLTVQN 362
C GGEVG+ S A + P + K VG+ +A W+ +TVQ
Sbjct: 102 CTGGEVGSKSEPAAAVAPAVIVDVKEEEKSVGNGGGGGGAQEAARWWRAGGADGGVTVQP 161
Query: 363 RQ-AQIAVVPSAAALIIRALKEPPRDRK 443
R+ A++AV P A A +RAL+ PPR K
Sbjct: 162 RERARVAVQP-ADARRLRALRAPPRQGK 188
>UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellular
organisms|Rep: 50S ribosomal protein L11 -
Corynebacterium efficiens
Length = 144
Score = 34.3 bits (75), Expect = 4.0
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Frame = +3
Query: 222 GEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV-QNRQAQIAV-VPSA 395
G+ + P +G G++ + AT + +G + V++TV ++R + P A
Sbjct: 19 GQANPAPPVGPALGAHGVNIMEFCKAYNAATENQRGNVVPVEITVYEDRSFDFKLKTPPA 78
Query: 396 AALIIRALKEPPRDRKKQKNIKHN---GNISLGRCSRHCEDHEKQINGPVPFWAQ*KRFL 566
A L+++A +K + H G +++ + E ++ +N A K
Sbjct: 79 AKLLLKAA-----GLQKGSGVPHTNKVGKVTMDQIREIAETKKEDLNAR-DIDAAAKIIA 132
Query: 567 GTAQSVGCTVEG 602
GTA+S+G TVEG
Sbjct: 133 GTARSMGITVEG 144
>UniRef50_Q9VGN4 Cluster: CG31374-PB, isoform B; n=4;
Sophophora|Rep: CG31374-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 935
Score = 33.9 bits (74), Expect = 5.3
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 276 SPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKN 455
SP ++ DDI K D + K + L ++NR+AQ A I E R++ ++KN
Sbjct: 536 SPDEL-DDIDKIRDDLQSTKQMLALELRNREAQDRENKKLLAKIRTLETELEREKSREKN 594
Query: 456 IKHNGNI 476
+++ N+
Sbjct: 595 LEYGSNV 601
>UniRef50_Q4T2R9 Cluster: Chromosome undetermined SCAF10201, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10201, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 990
Score = 33.5 bits (73), Expect = 6.9
Identities = 24/87 (27%), Positives = 35/87 (40%)
Frame = +3
Query: 207 CECVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIAVV 386
C C G +G SSL P P K+ G +A D GLK + + +
Sbjct: 124 CRCAGEALGK-SSLLPV--PYDAILKEPGCVVAHGLPDGVGLKKPCEYDTRTLMKILEQS 180
Query: 387 PSAAALIIRALKEPPRDRKKQKNIKHN 467
+ R ++PPRD K ++ HN
Sbjct: 181 HRIQFSVTRPAEDPPRDAKTSADLNHN 207
>UniRef50_Q0V4M2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1811
Score = 33.5 bits (73), Expect = 6.9
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -1
Query: 355 TVSCTVILRPFQSLVALAMSSPTFLGDRPRGPILGAKDDVAPTSPPTHSQIHDFNF 188
TVS T QS + ++ SP F+G P GP + A ++ +P+ PP++ Q F +
Sbjct: 1592 TVSPTPNFPGPQSGLGMSRFSPGFVGSHP-GPPMNAYNNYSPSPPPSNFQPRGFGY 1646
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,746,972
Number of Sequences: 1657284
Number of extensions: 15029450
Number of successful extensions: 37420
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 36240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37387
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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