Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L13
         (895 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1651 - 28395369-28395436,28395524-28395575,28395857-283960...   185   4e-47
12_02_0134 - 14071190-14071435,14071800-14071988,14072114-140721...    32   0.54 
09_06_0132 - 21042653-21042873,21042950-21043027,21043106-210431...    31   1.2  
11_06_0284 + 21909758-21913645                                         29   5.0  
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677...    29   6.6  
01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855     29   6.6  

>07_03_1651 -
           28395369-28395436,28395524-28395575,28395857-28396092,
           28396362-28396419,28396509-28396577,28396686-28396791,
           28397104-28397171,28397266-28397385,28398144-28398231,
           28399433-28399534,28399699-28399757,28399866-28400003,
           28400222-28400473,28400508-28400593,28401061-28401165,
           28402351-28402516
          Length = 590

 Score =  185 bits (451), Expect = 4e-47
 Identities = 95/147 (64%), Positives = 102/147 (69%)
 Frame = +1

Query: 373 DVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKV 552
           D   RAKVLSN IKQKR EKAGKW+VP+PKVR  A+ E+FKVL++GK K K WKRMVTK 
Sbjct: 424 DQTQRAKVLSNTIKQKRMEKAGKWEVPLPKVRPVAEEEMFKVLRTGKRKTKQWKRMVTKA 483

Query: 553 TFVGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPKFTNVYKLRC 732
           TFVG  FTRKPPK+ERFIRP  LRF KAHVTHPELK TF L II VKKNP       L  
Sbjct: 484 TFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGQMYSTLGV 543

Query: 733 HN*GYSDXS*YF*AGSVTQAGKVVWGK 813
              G          G VT AGKVVWGK
Sbjct: 544 LTRGTIIEVNVSELGLVTPAGKVVWGK 570



 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 35/83 (42%), Positives = 41/83 (49%)
 Frame = +3

Query: 123 HQKLYGSRLAYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIFNKERRNEKIQMKKKIKAHE 302
           HQK +G RL Y                     L G K K F K+R  EK QMKK +K H+
Sbjct: 341 HQKRHGRRLDYEERKRKRAAREVHKRSRDARQLLGAKGKRFAKKRYAEKAQMKKTLKMHD 400

Query: 303 EKNVKQNTEKVAEGALPVYLLDR 371
           E   +Q  + V EGALP YLLDR
Sbjct: 401 ESTSRQKVDDVQEGALPPYLLDR 423



 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +3

Query: 807 G*XAQVTNNPENDGAL 854
           G  AQVTNNPENDG +
Sbjct: 569 GKYAQVTNNPENDGCI 584


>12_02_0134 -
           14071190-14071435,14071800-14071988,14072114-14072194,
           14072261-14072404,14072528-14072761,14072836-14073981,
           14074863-14074922,14075178-14075420,14075509-14075607,
           14076196-14076367,14076597-14076735,14077514-14077624,
           14077695-14077797,14077885-14077962,14078054-14078122,
           14078203-14078275,14078891-14078975,14079473-14079536,
           14079963-14080073,14080139-14080213,14080306-14080398,
           14080982-14081056,14081172-14081261
          Length = 1259

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 76  CRISNQHAAVTHLLRAIKSFTVAGXLMXXXNGSVKLVSLINALKRRANSAV 228
           CR+SN HA V H   A+   T+A  L    N S  ++   +  K+R+  +V
Sbjct: 644 CRLSNPHALVVHCCLALA--TIAACLKSEGNSSASIILTSSQKKQRSRLSV 692


>09_06_0132 -
           21042653-21042873,21042950-21043027,21043106-21043167,
           21043504-21043578,21043664-21043752,21043825-21043905,
           21044939-21045076,21046299-21046429,21046521-21046592,
           21047218-21047275,21047362-21047461,21047544-21047617,
           21047701-21047836,21047913-21048137,21048211-21048446,
           21048949-21049081,21049195-21049484
          Length = 732

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 22/83 (26%), Positives = 34/83 (40%)
 Frame = -3

Query: 686 PIIGKQKVAFSSGCVTWAFLNLSAIGLMNRSNLGGLRVKFSPTNVTLVTMRFQAFLFDLP 507
           PII     AF+      A +    + L+  + + GL+V F    + L    F  + FD  
Sbjct: 389 PIITITDNAFNPVGYCLAIMKSEGVNLIGENFMSGLKVVFDRERMVLGWKNFNCYNFDES 448

Query: 506 DFRTLNTSASAWALTLGMGTSHF 438
               +N S SA     G+G S +
Sbjct: 449 SRLPVNPSPSAVPSKPGLGPSSY 471


>11_06_0284 + 21909758-21913645
          Length = 1295

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 269 DSDEKENQSARREECQTEHREGRR 340
           +  EKE +  R+EE Q E +EGR+
Sbjct: 480 EKQEKEKEEERKEEGQNEEKEGRK 503


>02_05_0146 -
           26267245-26267339,26267427-26267469,26267589-26267725,
           26268172-26268299,26268419-26268495,26268593-26268679,
           26268817-26268933,26269115-26269165,26269383-26269497,
           26270033-26270292
          Length = 369

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 299 RREECQTEHREGRRRCPACLSTGQGMFN 382
           R E C      G+  CP CL TG  M N
Sbjct: 312 RTERCPNCSGAGKVMCPTCLCTGMAMAN 339


>01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855
          Length = 152

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +1

Query: 466 RAQADAEVFKVLKSGKSKRKAWKRMVTKVTFVGENFTRK--PPKFERFIRP 612
           + Q   +V K +KSG  KRK+ K++ T VTF      +K   PK+ R   P
Sbjct: 13  KTQQALKVAKAVKSGSIKRKS-KKIRTSVTFHRPKTLKKARDPKYPRVSAP 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,393,925
Number of Sequences: 37544
Number of extensions: 356772
Number of successful extensions: 975
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)