Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L13
         (895 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82077-9|CAB04941.1|  259|Caenorhabditis elegans Hypothetical pr...   196   1e-50
AL032650-2|CAA21705.1|  259|Caenorhabditis elegans Hypothetical ...   196   1e-50
AF026209-11|AAB71282.1|  353|Caenorhabditis elegans Seven tm rec...    30   1.9  
Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81109-17|CAB03241.2|  497|Caenorhabditis elegans Hypothetical p...    29   5.9  
U80030-10|AAG24167.2|  378|Caenorhabditis elegans Serpentine rec...    29   5.9  
Z82078-9|CAE11308.1|  949|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U97008-10|AAB52315.2|  494|Caenorhabditis elegans Cytochrome p45...    28   7.8  
AL023844-13|CAE11312.1|  949|Caenorhabditis elegans Hypothetical...    28   7.8  

>Z82077-9|CAB04941.1|  259|Caenorhabditis elegans Hypothetical
           protein W09C5.1 protein.
          Length = 259

 Score =  196 bits (479), Expect = 1e-50
 Identities = 98/145 (67%), Positives = 110/145 (75%)
 Frame = +1

Query: 379 QSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTF 558
           Q+   VLSNMIKQKRK+KAGK++VPIP+VRA +DAE FKV+K+GK+ RK WKRMVTKVTF
Sbjct: 95  QTSGTVLSNMIKQKRKQKAGKFNVPIPQVRAVSDAEAFKVVKTGKTNRKGWKRMVTKVTF 154

Query: 559 VGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPKFTNVYKLRCHN 738
           VGE+FTRKP KFERFIRPM LRFKKAHVTHPEL+ TF LPI+GVKKNP       L    
Sbjct: 155 VGESFTRKPAKFERFIRPMGLRFKKAHVTHPELQTTFHLPIVGVKKNPSSQMYTSLGVIT 214

Query: 739 *GYSDXS*YF*AGSVTQAGKVVWGK 813
            G          G VTQ GKVVWGK
Sbjct: 215 KGTILEVNVSELGMVTQGGKVVWGK 239



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 38/112 (33%), Positives = 58/112 (51%)
 Frame = +3

Query: 123 HQKLYGSRLAYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIFNKERRNEKIQMKKKIKAHE 302
           H+K +G RL +                     LRG KAK+++K+R +EK++M+K +K HE
Sbjct: 10  HRKRHGRRLDHEERQRKKLARAAHDRSQMAKTLRGHKAKLYHKKRYSEKVEMRKLLKQHE 69

Query: 303 EKNVKQNTEKVAEGALPVYLLDRGCSI*G*SII*HDKTKA*RESWKMGCPHP 458
           EK+ K   E+  +GA+P YLLDR     G  +    K K  +++ K   P P
Sbjct: 70  EKDQKNTVEQPDKGAVPAYLLDRQQQTSGTVLSNMIKQKRKQKAGKFNVPIP 121



 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +3

Query: 807 G*XAQVTNNPENDGAL 854
           G  AQVTNNPENDG +
Sbjct: 238 GKFAQVTNNPENDGCI 253


>AL032650-2|CAA21705.1|  259|Caenorhabditis elegans Hypothetical
           protein W09C5.1 protein.
          Length = 259

 Score =  196 bits (479), Expect = 1e-50
 Identities = 98/145 (67%), Positives = 110/145 (75%)
 Frame = +1

Query: 379 QSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKRKAWKRMVTKVTF 558
           Q+   VLSNMIKQKRK+KAGK++VPIP+VRA +DAE FKV+K+GK+ RK WKRMVTKVTF
Sbjct: 95  QTSGTVLSNMIKQKRKQKAGKFNVPIPQVRAVSDAEAFKVVKTGKTNRKGWKRMVTKVTF 154

Query: 559 VGENFTRKPPKFERFIRPMALRFKKAHVTHPELKATFCLPIIGVKKNPKFTNVYKLRCHN 738
           VGE+FTRKP KFERFIRPM LRFKKAHVTHPEL+ TF LPI+GVKKNP       L    
Sbjct: 155 VGESFTRKPAKFERFIRPMGLRFKKAHVTHPELQTTFHLPIVGVKKNPSSQMYTSLGVIT 214

Query: 739 *GYSDXS*YF*AGSVTQAGKVVWGK 813
            G          G VTQ GKVVWGK
Sbjct: 215 KGTILEVNVSELGMVTQGGKVVWGK 239



 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 38/112 (33%), Positives = 58/112 (51%)
 Frame = +3

Query: 123 HQKLYGSRLAYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIFNKERRNEKIQMKKKIKAHE 302
           H+K +G RL +                     LRG KAK+++K+R +EK++M+K +K HE
Sbjct: 10  HRKRHGRRLDHEERQRKKLARAAHDRSQMAKTLRGHKAKLYHKKRYSEKVEMRKLLKQHE 69

Query: 303 EKNVKQNTEKVAEGALPVYLLDRGCSI*G*SII*HDKTKA*RESWKMGCPHP 458
           EK+ K   E+  +GA+P YLLDR     G  +    K K  +++ K   P P
Sbjct: 70  EKDQKNTVEQPDKGAVPAYLLDRQQQTSGTVLSNMIKQKRKQKAGKFNVPIP 121



 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +3

Query: 807 G*XAQVTNNPENDGAL 854
           G  AQVTNNPENDG +
Sbjct: 238 GKFAQVTNNPENDGCI 253


>AF026209-11|AAB71282.1|  353|Caenorhabditis elegans Seven tm
           receptor protein 262 protein.
          Length = 353

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/78 (21%), Positives = 39/78 (50%)
 Frame = -3

Query: 353 RQGTFGDLLCVLFDILLFVRFDFLFHLNLFIAAFLIEYFSFDTAEFARLFSAFMRLTSFT 174
           ++  F   +  L D LLFV F F   +++    F+  +FS   + + ++F +++ +  FT
Sbjct: 77  KESIFPATMSCLMD-LLFVGF-FGTSMSILALHFIYRFFSVTNSRYLKIFDSWLIIPIFT 134

Query: 173 LPFXXXISXPATVKLLMA 120
           +P    +    T  ++++
Sbjct: 135 VPLINGVLYMITGGIILS 152


>Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical
           protein T04A8.7b protein.
          Length = 606

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
 Frame = +1

Query: 421 RKEKAGKWDVPIP-KVRAQADAEVFKVLKSGKSKRKA-------WKRMVT----KVTFV- 561
           +KE+ GKW + +P K           V+K   S+  A       W   VT    K T + 
Sbjct: 20  KKEEHGKWSITVPAKEDGSCPIPHNSVIKIAVSRHGATHFKLSPWATFVTCPNPKETVIY 79

Query: 562 GENFTRKPPKFE----RFIRPMALRFKKAHV 642
            +NF   P K++    R  RP +LR  +AHV
Sbjct: 80  HQNFWNPPEKYQLKEARPARPASLRIYEAHV 110


>Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical
           protein T04A8.7a protein.
          Length = 681

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 17/91 (18%)
 Frame = +1

Query: 421 RKEKAGKWDVPIP-KVRAQADAEVFKVLKSGKSKRKA-------WKRMVT----KVTFV- 561
           +KE+ GKW + +P K           V+K   S+  A       W   VT    K T + 
Sbjct: 95  KKEEHGKWSITVPAKEDGSCPIPHNSVIKIAVSRHGATHFKLSPWATFVTCPNPKETVIY 154

Query: 562 GENFTRKPPKFE----RFIRPMALRFKKAHV 642
            +NF   P K++    R  RP +LR  +AHV
Sbjct: 155 HQNFWNPPEKYQLKEARPARPASLRIYEAHV 185


>Z81109-17|CAB03241.2|  497|Caenorhabditis elegans Hypothetical
           protein R10D12.10 protein.
          Length = 497

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
 Frame = +3

Query: 231 KAKIFNKERRNEKIQMKKKIKAHEEK--NVKQNTEKVAE 341
           K K  +KE+  EK + K+KIK  E+K  ++++ TE+ +E
Sbjct: 389 KEKEKDKEKEREKRKSKEKIKEKEKKMGSLEKTTERTSE 427


>U80030-10|AAG24167.2|  378|Caenorhabditis elegans Serpentine
           receptor, class w protein136 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/51 (33%), Positives = 22/51 (43%)
 Frame = -3

Query: 659 FSSGCVTWAFLNLSAIGLMNRSNLGGLRVKFSPTNVTLVTMRFQAFLFDLP 507
           FS  C TW FL+++ I  +   N   L+ K      T     F  FL  LP
Sbjct: 122 FSRRCSTWLFLSIAFIRTLIVRNPMNLKYKQLSNQPTAFYTIFGVFLLSLP 172


>Z82078-9|CAE11308.1|  949|Caenorhabditis elegans Hypothetical
           protein Y48A6B.11b protein.
          Length = 949

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 246 NKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYL 362
           N E+  + + ++ K + H EK   +N E + EG  PV++
Sbjct: 18  NDEKPAKSVLLEPKYRDHHEKISFRNKENMEEGEKPVFV 56


>U97008-10|AAB52315.2|  494|Caenorhabditis elegans Cytochrome p450
           family protein 35A2 protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
 Frame = +1

Query: 364 WTGDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAEVFKVLKSGKSKR---KAWK 534
           W+    ++    +  IK+    K+GK+ +    ++   DA + K+ K G+SK    +  K
Sbjct: 237 WSAQETAKNFAAAEAIKRVESIKSGKYVIDENNLQDYTDAFLLKIQKEGESKDFNIETLK 296

Query: 535 RMVTKVTFVGENFT 576
            M+  +   G+  T
Sbjct: 297 TMIIDLWMTGQETT 310


>AL023844-13|CAE11312.1|  949|Caenorhabditis elegans Hypothetical
           protein Y48A6B.11b protein.
          Length = 949

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 246 NKERRNEKIQMKKKIKAHEEKNVKQNTEKVAEGALPVYL 362
           N E+  + + ++ K + H EK   +N E + EG  PV++
Sbjct: 18  NDEKPAKSVLLEPKYRDHHEKISFRNKENMEEGEKPVFV 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,610,703
Number of Sequences: 27780
Number of extensions: 316809
Number of successful extensions: 1043
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)