Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L12
(971 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 69 6e-12
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 69 6e-12
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 63 4e-10
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 33 0.26
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 32 0.60
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 31 1.0
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 31 1.0
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 29 4.2
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 29 4.2
08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,130... 28 9.8
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 68.9 bits (161), Expect = 6e-12
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +1
Query: 295 LGQGIQPTRELVQNL*XGPSIIRIQRQKGLYFXRRLKVPPP-NQPIYPEHWNKNYS*GXF 471
+G + P ++L + + P ++RIQRQ+ + +RLKVPP NQ + +KN + F
Sbjct: 34 IGGALPPKKDLHRFV-KWPKVVRIQRQRRI-LKQRLKVPPALNQ--FTRTLDKNLATNLF 89
Query: 472 QEFWRNTGLRTXXXXXXXXXXXXXXXXXXXXXXXXXXANTIRSGTNTVTKLVEKKKAQLV 651
+ + ++ G N VT L+E+ KAQLV
Sbjct: 90 KMLLKYRP--EDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLV 147
Query: 652 VIAHDVDPIELVLFLXALCRKM 717
VIAHDVDPIELV++L ALCRKM
Sbjct: 148 VIAHDVDPIELVVWLPALCRKM 169
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 68.9 bits (161), Expect = 6e-12
Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Frame = +1
Query: 295 LGQGIQPTRELVQNL*XGPSIIRIQRQKGLYFXRRLKVPPP-NQPIYPEHWNKNYS*GXF 471
+G + P ++L + + P ++RIQRQ+ + +RLKVPP NQ + +KN + F
Sbjct: 18 IGGALPPKKDLHRFV-KWPKVVRIQRQRRI-LKQRLKVPPALNQ--FTRTLDKNLATNLF 73
Query: 472 QEFWRNTGLRTXXXXXXXXXXXXXXXXXXXXXXXXXXANTIRSGTNTVTKLVEKKKAQLV 651
+ + ++ G N VT L+E+ KAQLV
Sbjct: 74 KMLLKYRP--EDKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYLIEQSKAQLV 131
Query: 652 VIAHDVDPIELVLFLXALCRKM 717
VIAHDVDPIELV++L ALCRKM
Sbjct: 132 VIAHDVDPIELVVWLPALCRKM 153
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 62.9 bits (146), Expect = 4e-10
Identities = 29/42 (69%), Positives = 36/42 (85%)
Frame = +1
Query: 592 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLXALCRKM 717
++ G + VT L+E+ KAQLVVIAHDVDPIELV++L ALCRKM
Sbjct: 113 VKYGLDHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKM 154
Score = 28.3 bits (60), Expect = 9.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 304 GIQPTRELVQNL*XGPSIIRIQRQKGLYFXRRLKVPP 414
G P R+ + P +RIQRQ+ + +RLKVPP
Sbjct: 37 GALPPRKDLHRFVRWPKAVRIQRQRRV-LKQRLKVPP 72
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 33.5 bits (73), Expect = 0.26
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 592 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLXAL 705
++ G N TK + + A+ VV+A D +P+E++L L L
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLL 70
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 32.3 bits (70), Expect = 0.60
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 592 IRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLXAL 705
++ G N TK + + ++ VV+A D +P+E++L L L
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLL 72
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 601 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLXALC 708
G K +EK AQL V+A D D + V + ALC
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALC 76
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 601 GTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLXALC 708
G K +EK AQL V+A D D + V + ALC
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALC 76
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 583 ANTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLXALCRK 714
A ++ G V K + + + L +IA ++ PI+++ + LC +
Sbjct: 42 AKCLKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEE 85
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 583 ANTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLXALCRK 714
A ++ G V K + + L VIA ++ PI+++ + LC +
Sbjct: 42 AKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEE 85
>08_01_0162 - 1302497-1302787,1304608-1305271,1305380-1306927,
1307360-1308768
Length = 1303
Score = 28.3 bits (60), Expect = 9.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +3
Query: 345 WPKYYPHPAPERAVLQXSSESAPSESTNLPRTLEQELQLRXFSRILEKYRPE 500
WP P P R +L SS S S S + E+EL L EK + E
Sbjct: 1217 WPASCRQP-PRRTILSGSSSSVRSSSDSAEEDTEEELSLEAEQDDDEKMQAE 1267
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,542,086
Number of Sequences: 37544
Number of extensions: 313123
Number of successful extensions: 750
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2823252340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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