Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L12
         (971 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    94   7e-21

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 93.9 bits (223), Expect = 7e-21
 Identities = 64/187 (34%), Positives = 91/187 (48%), Gaps = 1/187 (0%)
 Frame = +1

Query: 214 PLVGQKRLRPSSSXILFFETAAKXTLPLGQGIQPTRELVQNL*XGPSIIRIQRQKGLYFX 393
           PL   K++         FE   K    +GQ +QP R+L + +   P  IRIQR + +   
Sbjct: 21  PLAKPKKVEVKKVVNPLFEKRVK-NYGIGQNVQPKRDLSRFV-KWPKYIRIQRHRAI-LQ 77

Query: 394 RRLKVPPP-NQPIYPEHWNKNYS*GXFQEFWRNTGLRTXXXXXXXXXXXXXXXXXXXXXX 570
           +RLK+PPP NQ  + +  +K  +     + W+                            
Sbjct: 78  KRLKIPPPINQ--FTQTLDKPTA-QQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEP 134

Query: 571 XXXXANTIRSGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLXALCRKMGRXILXCQGQV 750
               AN +R G N+V K+VE+KKAQLV+IAHDVDPIELV++L ALCRKMG      +G+ 
Sbjct: 135 PSKRANQLRQGINSVVKMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKA 194

Query: 751 PXSVHLY 771
                +Y
Sbjct: 195 RLGTLVY 201



 Score = 37.5 bits (83), Expect = 6e-04
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +3

Query: 756 LGALVHRKXCTCLALTNVEFX*TGPXFXRVVEAIKKXXNE 875
           LG LV+RK CTC+ALT  E     P   ++VE IK   N+
Sbjct: 196 LGTLVYRKTCTCVALTQFENA-DKPNLAKLVETIKTNFND 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,705
Number of Sequences: 2352
Number of extensions: 10244
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106063542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)