Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L11
         (1017 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010           30   3.4  
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228...    30   3.4  
03_06_0659 - 35345095-35345135,35345982-35347365                       29   5.9  
03_01_0181 + 1464082-1464626,1465327-1465480                           29   5.9  
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879...    29   7.9  
03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798     29   7.9  

>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
          Length = 520

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 254 NSLTKSKDAQDFSKAWKDGSESVLQQLKRLRQESPXERSETR 379
           +SL++  +A  +S+A +   ES L   KRLR E     S+TR
Sbjct: 103 SSLSEEHEAPSYSQALRCTPESSLDSTKRLRTEVSSSPSQTR 144


>06_01_0318 -
           2284481-2284594,2285340-2286044,2286589-2286609,
           2287186-2287257,2287762-2287842,2288059-2288133,
           2288197-2288484
          Length = 451

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 20/71 (28%), Positives = 27/71 (38%)
 Frame = +3

Query: 222 GSSIRL*NNSLTRSPSQRTHRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL 401
           G S RL ++   R P       S   G+ AP       ++  +    SAR RER   G  
Sbjct: 215 GDSSRLGSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRKTLPSARDRERSSDGEC 274

Query: 402 WNSRGRTSSAR 434
             S  R   +R
Sbjct: 275 ARSSPRRRRSR 285


>03_06_0659 - 35345095-35345135,35345982-35347365
          Length = 474

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 19/62 (30%), Positives = 24/62 (38%)
 Frame = +1

Query: 304 GRLRVRAATAQTPSPRVSXGALGDANGKAKGGFGTVEAEHRAHGRGAPARPTLNVEKNAT 483
           G   VR A A+T  P         AN +    +    A H A G G P RP + +     
Sbjct: 264 GHCGVRMALAETGWPNAGDLDQFGANARNAATYNRNMARHLASGAGTPRRPGMRMPAFVF 323

Query: 484 AL 489
           AL
Sbjct: 324 AL 325


>03_01_0181 + 1464082-1464626,1465327-1465480
          Length = 232

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = +3

Query: 300 GRTAPSPCCNSSNAFAKSLQXSAR---RRERQGQGRLWNSRGRTSSARPRSSG 449
           G+  P P   +S   ++  Q +A    R ER+G  R W+S G  SS R  S G
Sbjct: 87  GKAEPGPARTASGRQSEQQQQAAAAAGRPERRGSARRWDSAG-GSSFRSSSDG 138


>05_06_0277 +
           26885621-26886064,26886148-26886317,26887038-26887941,
           26888544-26888575,26888862-26888928,26889116-26889173,
           26889329-26889421,26890366-26890480,26890847-26890894,
           26891012-26891057,26891161-26891231,26891865-26891870,
           26891991-26892038,26892439-26892488,26892892-26893154
          Length = 804

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 28/107 (26%), Positives = 47/107 (43%)
 Frame = +3

Query: 132 SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSARLGRTA 311
           +S    RS  R +G+ RRS +    R+P Q   ++       RSP Q   R+ +     +
Sbjct: 266 TSSHRERSPVRRNGSPRRSPVRSIGRSP-QRDRVK----EQVRSPKQAQSRSRS----PS 316

Query: 312 PSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPRSSGK 452
           P+    S +   +S +    + ER+G       R +T+S   R SG+
Sbjct: 317 PARKRESRSPSPRSKRLRRAQSEREGADATEGDRRKTTSREERDSGR 363


>03_06_0710 + 35676497-35677204,35677837-35677921,35679722-35679798
          Length = 289

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
 Frame = +1

Query: 304 GRLRVRAATAQTPSPRVSXGALGDANGKAKGGFGTVEAEHRAHGRGAPARPTLNVEKNAT 483
           G  R + A A TPS +           K KG     E  HR  G G    PT   +K  +
Sbjct: 64  GSNRKKKADAGTPSKKPKRQPPEPKPRKHKGAKS--EKPHRVSGEGEKPTPTKKKKKKES 121

Query: 484 A---LREKLQA-AVQNTVQESQKLAKK 552
           +    REK QA A  +T  +  K AK+
Sbjct: 122 SKEPKREKQQASAPMSTPSKKNKEAKR 148


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,343,068
Number of Sequences: 37544
Number of extensions: 318661
Number of successful extensions: 1629
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2998973440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)