Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L11
(1017 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 36 0.18
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 36 0.18
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 36 0.18
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 36 0.18
AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein pro... 36 0.18
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 36 0.18
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 33 1.7
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 33 1.7
AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-l... 32 2.9
AL162258-6|CAI19679.1| 202|Homo sapiens chromosome 1 open readi... 32 2.9
AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase p... 32 2.9
AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase p... 32 2.9
AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein. 32 2.9
AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein. 32 3.8
BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 5.1
BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 5.1
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 31 5.1
AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-... 31 5.1
AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 5.1
AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 5.1
AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processi... 31 5.1
AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processi... 31 5.1
AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens ... 31 5.1
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 31 5.1
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 31 5.1
AB037798-1|BAA92615.1| 988|Homo sapiens KIAA1377 protein protein. 31 5.1
BC120962-1|AAI20963.1| 249|Homo sapiens chromosome 1 open readi... 31 8.9
BC120961-1|AAI20962.1| 249|Homo sapiens chromosome 1 open readi... 31 8.9
BC108721-1|AAI08722.1| 249|Homo sapiens chromosome 1 open readi... 31 8.9
BC070027-1|AAH70027.1| 65|Homo sapiens C1orf77 protein protein. 31 8.9
BC059949-1|AAH59949.1| 194|Homo sapiens C1orf77 protein protein. 31 8.9
BC002733-1|AAH02733.1| 118|Homo sapiens C1orf77 protein protein. 31 8.9
AL162258-7|CAI19680.1| 223|Homo sapiens chromosome 1 open readi... 31 8.9
AL162258-5|CAI19678.1| 248|Homo sapiens chromosome 1 open readi... 31 8.9
AF261137-1|AAG44673.1| 248|Homo sapiens HT031 protein. 31 8.9
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 36.3 bits (80), Expect = 0.18
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NN 248
SP R + S +T GR S R RS RS RSR R S
Sbjct: 536 SPQRPGWSRSRNTQRRGRS--RSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRR 593
Query: 249 SLTRSPSQR--THRTSARLGRT-APSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGR 419
S +R+P++R RT AR GR+ + +P S + + S R + GR SR R
Sbjct: 594 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR---SRSR 650
Query: 420 TSSARPRSSGK 452
T + R RS +
Sbjct: 651 TPARRGRSRSR 661
Score = 35.5 bits (78), Expect = 0.31
Identities = 33/124 (26%), Positives = 54/124 (43%)
Frame = +3
Query: 81 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTR 260
ISS+ + HGR R H R G +R + R+ + + R +S +R
Sbjct: 453 ISSSPTSKNRSHGRAKRDKSHSHTPSRRM-GRSRSPATAKRGRSRSRTPTKR--GHSRSR 509
Query: 261 SPSQRTHRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
SP R R++ R GR+ S + + +R +R+G+ R RGR+ S P
Sbjct: 510 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRS-ARRGRSHSRSPA 568
Query: 441 SSGK 452
+ G+
Sbjct: 569 TRGR 572
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator
subunit SRm300 protein.
Length = 2296
Score = 36.3 bits (80), Expect = 0.18
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NN 248
SP R + S +T GR S R RS RS RSR R S
Sbjct: 536 SPQRPGWSRSRNTQRRGRS--RSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRR 593
Query: 249 SLTRSPSQR--THRTSARLGRT-APSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGR 419
S +R+P++R RT AR GR+ + +P S + + S R + GR SR R
Sbjct: 594 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR---SRSR 650
Query: 420 TSSARPRSSGK 452
T + R RS +
Sbjct: 651 TPARRGRSRSR 661
Score = 35.5 bits (78), Expect = 0.31
Identities = 33/124 (26%), Positives = 54/124 (43%)
Frame = +3
Query: 81 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTR 260
ISS+ + HGR R H R G +R + R+ + + R +S +R
Sbjct: 453 ISSSPTSKNRSHGRAKRDKSHSHTPSRRM-GRSRSPATAKRGRSRSRTPTKR--GHSRSR 509
Query: 261 SPSQRTHRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
SP R R++ R GR+ S + + +R +R+G+ R RGR+ S P
Sbjct: 510 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRS-ARRGRSHSRSPA 568
Query: 441 SSGK 452
+ G+
Sbjct: 569 TRGR 572
Score = 33.1 bits (72), Expect = 1.7
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 87 SALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS-RLLQGHRTPHQGSSIRL*NNSLTRS 263
S+ + S+ H + R++ R RS P +R R +P RL S + S
Sbjct: 1652 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS 1711
Query: 264 PSQRTH-RTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
S T RT R R SP +S KS RR + + + RGR+ S +PR
Sbjct: 1712 SSPETRSRTPPRHRR---SPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPR 1768
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 36.3 bits (80), Expect = 0.18
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NN 248
SP R + S +T GR S R RS RS RSR R S
Sbjct: 536 SPQRPGWSRSRNTQRRGRS--RSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRR 593
Query: 249 SLTRSPSQR--THRTSARLGRT-APSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGR 419
S +R+P++R RT AR GR+ + +P S + + S R + GR SR R
Sbjct: 594 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR---SRSR 650
Query: 420 TSSARPRSSGK 452
T + R RS +
Sbjct: 651 TPARRGRSRSR 661
Score = 35.5 bits (78), Expect = 0.31
Identities = 33/124 (26%), Positives = 54/124 (43%)
Frame = +3
Query: 81 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTR 260
ISS+ + HGR R H R G +R + R+ + + R +S +R
Sbjct: 453 ISSSPTSKNRSHGRAKRDKSHSHTPSRRM-GRSRSPATAKRGRSRSRTPTKR--GHSRSR 509
Query: 261 SPSQRTHRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
SP R R++ R GR+ S + + +R +R+G+ R RGR+ S P
Sbjct: 510 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRS-ARRGRSHSRSPA 568
Query: 441 SSGK 452
+ G+
Sbjct: 569 TRGR 572
Score = 33.1 bits (72), Expect = 1.7
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 87 SALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS-RLLQGHRTPHQGSSIRL*NNSLTRS 263
S+ + S+ H + R++ R RS P +R R +P RL S + S
Sbjct: 1652 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS 1711
Query: 264 PSQRTH-RTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
S T RT R R SP +S KS RR + + + RGR+ S +PR
Sbjct: 1712 SSPETRSRTPPRHRR---SPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPR 1768
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 36.3 bits (80), Expect = 0.18
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NN 248
SP R + S +T GR S R RS RS RSR R S
Sbjct: 501 SPQRPGWSRSRNTQRRGRS--RSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRR 558
Query: 249 SLTRSPSQR--THRTSARLGRT-APSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGR 419
S +R+P++R RT AR GR+ + +P S + + S R + GR SR R
Sbjct: 559 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR---SRSR 615
Query: 420 TSSARPRSSGK 452
T + R RS +
Sbjct: 616 TPARRGRSRSR 626
Score = 35.5 bits (78), Expect = 0.31
Identities = 33/124 (26%), Positives = 54/124 (43%)
Frame = +3
Query: 81 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTR 260
ISS+ + HGR R H R G +R + R+ + + R +S +R
Sbjct: 418 ISSSPTSKNRSHGRAKRDKSHSHTPSRRM-GRSRSPATAKRGRSRSRTPTKR--GHSRSR 474
Query: 261 SPSQRTHRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
SP R R++ R GR+ S + + +R +R+G+ R RGR+ S P
Sbjct: 475 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRS-ARRGRSHSRSPA 533
Query: 441 SSGK 452
+ G+
Sbjct: 534 TRGR 537
>AB016087-1|BAA83713.1| 1262|Homo sapiens RNA binding protein
protein.
Length = 1262
Score = 36.3 bits (80), Expect = 0.18
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NN 248
SP R + S +T GR S R RS RS RSR R S
Sbjct: 326 SPQRPGWSRSRNTQRRGRS--RSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRR 383
Query: 249 SLTRSPSQR--THRTSARLGRT-APSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGR 419
S +R+P++R RT AR GR+ + +P S + + S R + GR SR R
Sbjct: 384 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR---SRSR 440
Query: 420 TSSARPRSSGK 452
T + R RS +
Sbjct: 441 TPARRGRSRSR 451
Score = 35.5 bits (78), Expect = 0.31
Identities = 33/124 (26%), Positives = 54/124 (43%)
Frame = +3
Query: 81 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTR 260
ISS+ + HGR R H R G +R + R+ + + R +S +R
Sbjct: 243 ISSSPTSKNRSHGRAKRDKSHSHTPSRRM-GRSRSPATAKRGRSRSRTPTKR--GHSRSR 299
Query: 261 SPSQRTHRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
SP R R++ R GR+ S + + +R +R+G+ R RGR+ S P
Sbjct: 300 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRS-ARRGRSHSRSPA 358
Query: 441 SSGK 452
+ G+
Sbjct: 359 TRGR 362
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 36.3 bits (80), Expect = 0.18
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NN 248
SP R + S +T GR S R RS RS RSR R S
Sbjct: 584 SPQRPGWSRSRNTQRRGRS--RSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRR 641
Query: 249 SLTRSPSQR--THRTSARLGRT-APSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGR 419
S +R+P++R RT AR GR+ + +P S + + S R + GR SR R
Sbjct: 642 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR---SRSR 698
Query: 420 TSSARPRSSGK 452
T + R RS +
Sbjct: 699 TPARRGRSRSR 709
Score = 35.5 bits (78), Expect = 0.31
Identities = 33/124 (26%), Positives = 54/124 (43%)
Frame = +3
Query: 81 ISSALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTR 260
ISS+ + HGR R H R G +R + R+ + + R +S +R
Sbjct: 501 ISSSPTSKNRSHGRAKRDKSHSHTPSRRM-GRSRSPATAKRGRSRSRTPTKR--GHSRSR 557
Query: 261 SPSQRTHRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
SP R R++ R GR+ S + + +R +R+G+ R RGR+ S P
Sbjct: 558 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRS-ARRGRSHSRSPA 616
Query: 441 SSGK 452
+ G+
Sbjct: 617 TRGR 620
Score = 33.1 bits (72), Expect = 1.7
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 87 SALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS-RLLQGHRTPHQGSSIRL*NNSLTRS 263
S+ + S+ H + R++ R RS P +R R +P RL S + S
Sbjct: 1700 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS 1759
Query: 264 PSQRTH-RTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
S T RT R R SP +S KS RR + + + RGR+ S +PR
Sbjct: 1760 SSPETRSRTPPRHRR---SPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPR 1816
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 33.1 bits (72), Expect = 1.7
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 87 SALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS-RLLQGHRTPHQGSSIRL*NNSLTRS 263
S+ + S+ H + R++ R RS P +R R +P RL S + S
Sbjct: 684 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS 743
Query: 264 PSQRTH-RTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
S T RT R R SP +S KS RR + + + RGR+ S +PR
Sbjct: 744 SSPETRSRTPPRHRR---SPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPR 800
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 33.1 bits (72), Expect = 1.7
Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Frame = +3
Query: 87 SALSLSTVHHGRQVRSSLRLHRSGPRSDGATRRS-RLLQGHRTPHQGSSIRL*NNSLTRS 263
S+ + S+ H + R++ R RS P +R R +P RL S + S
Sbjct: 175 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS 234
Query: 264 PSQRTH-RTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPR 440
S T RT R R SP +S KS RR + + + RGR+ S +PR
Sbjct: 235 SSPETRSRTPPRHRR---SPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPR 291
>AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-like
5 (cholinesterase-related cell division controller)
protein.
Length = 1512
Score = 32.3 bits (70), Expect = 2.9
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = +3
Query: 102 STVHHGRQVRSSLRLHRS-GPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRT 278
S V H + SLR +S P G++ SR L +P+ S RSPS
Sbjct: 325 SPVSH--RASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPY----------SRRRSPSYSR 372
Query: 279 HRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSS 446
H + R G +PSP +SS ++S RR + + R ++SR S +R R S
Sbjct: 373 HSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLS 429
>AL162258-6|CAI19679.1| 202|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 202
Score = 32.3 bits (70), Expect = 2.9
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 271 KGRTGLQQGL-EGRLRVRAATAQTPSPRVSXGALGDANGKAKGGFGTVEAEHRAHGRGAP 447
+G +Q+GL G LR AT +S G G+ +GGFG R GRGA
Sbjct: 103 RGLPIIQRGLPRGGLRGGRATRTLLRGGMSLRGRGMI-GRGRGGFGG-RGRGRGRGRGAL 160
Query: 448 ARPTLNVEK 474
ARP L E+
Sbjct: 161 ARPVLTKEQ 169
>AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1452
Score = 32.3 bits (70), Expect = 2.9
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = +3
Query: 102 STVHHGRQVRSSLRLHRS-GPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRT 278
S V H + SLR +S P G++ SR L +P+ S RSPS
Sbjct: 325 SPVSH--RASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPY----------SRRRSPSYSR 372
Query: 279 HRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSS 446
H + R G +PSP +SS ++S RR + + R ++SR S +R R S
Sbjct: 373 HSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLS 429
>AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1512
Score = 32.3 bits (70), Expect = 2.9
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = +3
Query: 102 STVHHGRQVRSSLRLHRS-GPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRT 278
S V H + SLR +S P G++ SR L +P+ S RSPS
Sbjct: 325 SPVSH--RASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPY----------SRRRSPSYSR 372
Query: 279 HRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSS 446
H + R G +PSP +SS ++S RR + + R ++SR S +R R S
Sbjct: 373 HSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLS 429
>AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein.
Length = 784
Score = 32.3 bits (70), Expect = 2.9
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = +3
Query: 102 STVHHGRQVRSSLRLHRS-GPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRT 278
S V H + SLR +S P G++ SR L +P+ S RSPS
Sbjct: 325 SPVSH--RASQSLRSRKSPSPAGGGSSPYSRRLPRSPSPY----------SRRRSPSYSR 372
Query: 279 HRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSS 446
H + R G +PSP +SS ++S RR + + R ++SR S +R R S
Sbjct: 373 HSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLS 429
>AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein.
Length = 939
Score = 31.9 bits (69), Expect = 3.8
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +3
Query: 132 SSLRLHRS-GPRSD-GATRRSRLLQG---HRTPHQGSSIRL*NNSLTRSPSQRTHRTSAR 296
SS R HRS RS G + RS HR+P Q S R + SPS+R+HR+ AR
Sbjct: 620 SSERRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSH-RGPSERRHHSPSKRSHRSPAR 678
Query: 297 LGRTAPSPCCNSSNAFAKSLQXSARR 374
+PS + S + S RR
Sbjct: 679 RSHRSPSERSHHSPSERSHHSPSERR 704
>BC132963-1|AAI32964.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.5 bits (68), Expect = 5.1
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSA 293
H R RS R HRS RS A +RSR ++ + + +N +RS SQ +
Sbjct: 425 HSRS-RSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVE 483
Query: 294 RLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSSGK 452
+ + SP S ++S + S +R + + + R R+ S S K
Sbjct: 484 KSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEK 537
>BC130346-1|AAI30347.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.5 bits (68), Expect = 5.1
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSA 293
H R RS R HRS RS A +RSR ++ + + +N +RS SQ +
Sbjct: 425 HSRS-RSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVE 483
Query: 294 RLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSSGK 452
+ + SP S ++S + S +R + + + R R+ S S K
Sbjct: 484 KSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEK 537
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 31.5 bits (68), Expect = 5.1
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Frame = +3
Query: 114 HGRQVRSSLRLHRS---GPRSDGATRRSRLLQGH--RTPHQGSSIRL*NNSLTRSPSQRT 278
+GR+ RS R HRS GP + RSR R+P+ S + +RSP R+
Sbjct: 114 YGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYGRSPYSRSPYS--RSRYSRSPYSRS 171
Query: 279 HRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPRSS 446
+R G + S S++ +++ S+R + G S + S+ R S
Sbjct: 172 RYRESRYGGSHYSSSGYSNSRYSR--YHSSRSHSKSGSSTSSRSASTSKSSSARRS 225
>AY211915-1|AAO65168.1| 148|Homo sapiens sarcoma antigen NY-SAR-27
protein.
Length = 148
Score = 31.5 bits (68), Expect = 5.1
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSA 293
H R RS R HRS RS A +RSR ++ + + +N +RS SQ +
Sbjct: 27 HSRS-RSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVE 85
Query: 294 RLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSSGK 452
+ + SP S ++S + S +R + + + R R+ S S K
Sbjct: 86 KSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEK 139
>AL591719-6|CAH72070.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.5 bits (68), Expect = 5.1
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSA 293
H R RS R HRS RS A +RSR ++ + + +N +RS SQ +
Sbjct: 314 HSRS-RSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVE 372
Query: 294 RLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSSGK 452
+ + SP S ++S + S +R + + + R R+ S S K
Sbjct: 373 KSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEK 426
>AL591719-5|CAH72069.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.5 bits (68), Expect = 5.1
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSA 293
H R RS R HRS RS A +RSR ++ + + +N +RS SQ +
Sbjct: 425 HSRS-RSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVE 483
Query: 294 RLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSSGK 452
+ + SP S ++S + S +R + + + R R+ S S K
Sbjct: 484 KSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEK 537
>AL160171-7|CAI12934.1| 435|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 435
Score = 31.5 bits (68), Expect = 5.1
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSA 293
H R RS R HRS RS A +RSR ++ + + +N +RS SQ +
Sbjct: 314 HSRS-RSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVE 372
Query: 294 RLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSSGK 452
+ + SP S ++S + S +R + + + R R+ S S K
Sbjct: 373 KSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEK 426
>AL160171-6|CAI12933.1| 546|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing B protein.
Length = 546
Score = 31.5 bits (68), Expect = 5.1
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSA 293
H R RS R HRS RS A +RSR ++ + + +N +RS SQ +
Sbjct: 425 HSRS-RSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVE 483
Query: 294 RLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSSGK 452
+ + SP S ++S + S +R + + + R R+ S S K
Sbjct: 484 KSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEK 537
>AK001192-1|BAA91546.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ10330 fis, clone NT2RM2000624, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 4. ).
Length = 546
Score = 31.5 bits (68), Expect = 5.1
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +3
Query: 114 HGRQVRSSLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL*NNSLTRSPSQRTHRTSA 293
H R RS R HRS RS A +RSR ++ + + +N +RS SQ +
Sbjct: 425 HSRS-RSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVE 483
Query: 294 RLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRL-WNSRGRTSSARPRSSGK 452
+ + SP S ++S + S +R + + + R R+ S S K
Sbjct: 484 KSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEK 537
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 31.5 bits (68), Expect = 5.1
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Frame = +3
Query: 114 HGRQVRSSLRLHRS---GPRSDGATRRSRLLQGH--RTPHQGSSIRL*NNSLTRSPSQRT 278
+GR+ RS R HRS GP + RSR R+P+ S + +RSP R+
Sbjct: 111 YGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYS--RSRYSRSPYSRS 168
Query: 279 HRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPRSS 446
+R G + S S++ +++ S+R + G S + S+ R S
Sbjct: 169 RYRESRYGGSHYSSSGYSNSRYSR--YHSSRSHSKSGSSTSSRSASTSKSSSARRS 222
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 31.5 bits (68), Expect = 5.1
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Frame = +3
Query: 114 HGRQVRSSLRLHRS---GPRSDGATRRSRLLQGH--RTPHQGSSIRL*NNSLTRSPSQRT 278
+GR+ RS R HRS GP + RSR R+P+ S + +RSP R+
Sbjct: 121 YGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYS--RSRYSRSPYSRS 178
Query: 279 HRTSARLGRTAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSARPRSS 446
+R G + S S++ +++ S+R + G S + S+ R S
Sbjct: 179 RYRESRYGGSHYSSSGYSNSRYSR--YHSSRSHSKSGSSTSSRSASTSKSSSARRS 232
>AB037798-1|BAA92615.1| 988|Homo sapiens KIAA1377 protein protein.
Length = 988
Score = 31.5 bits (68), Expect = 5.1
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 242 EQQFNSLTKSKDAQDFSKAWKDGSESVLQQLKRLRQESPXERSETRTARPREALEQSRQN 421
E+ + S+T ++ WK G +VL Q KR + R + R LEQ RQN
Sbjct: 786 EESYPSVTLRTAEEESVPLWKRGP-NVLHQNKRATGSTVMRRKRIAETKRRNILEQKRQN 844
>BC120962-1|AAI20963.1| 249|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 249
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 187 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 216
>BC120961-1|AAI20962.1| 249|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 249
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 187 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 216
>BC108721-1|AAI08722.1| 249|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 249
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 187 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 216
>BC070027-1|AAH70027.1| 65|Homo sapiens C1orf77 protein protein.
Length = 65
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 3 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 32
>BC059949-1|AAH59949.1| 194|Homo sapiens C1orf77 protein protein.
Length = 194
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 132 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 161
>BC002733-1|AAH02733.1| 118|Homo sapiens C1orf77 protein protein.
Length = 118
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 56 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 85
>AL162258-7|CAI19680.1| 223|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 223
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 161 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 190
>AL162258-5|CAI19678.1| 248|Homo sapiens chromosome 1 open reading
frame 77 protein.
Length = 248
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 186 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 215
>AF261137-1|AAG44673.1| 248|Homo sapiens HT031 protein.
Length = 248
Score = 30.7 bits (66), Expect = 8.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 382 GKAKGGFGTVEAEHRAHGRGAPARPTLNVEK 474
G+ +GGFG R GRGA ARP L E+
Sbjct: 186 GRGRGGFGG-RGRGRGRGRGALARPVLTKEQ 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,622,403
Number of Sequences: 237096
Number of extensions: 1562214
Number of successful extensions: 6289
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6254
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13654981522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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