Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L11
(1017 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical p... 32 0.57
Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical p... 32 0.57
Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical p... 32 0.57
AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kin... 32 0.57
Z27079-8|CAA81595.2| 798|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever sho... 30 3.0
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho... 30 3.0
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 29 5.3
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 29 5.3
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 29 5.3
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 29 5.3
Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical pr... 29 7.0
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 7.0
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 7.0
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 7.0
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 7.0
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 29 7.0
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 29 7.0
AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical... 29 7.0
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 28 9.3
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 28 9.3
>Z81146-10|CAB54274.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.57
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 242
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 243 NNSLTRSPSQRTHRTSA 293
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81146-9|CAB03528.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.57
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 242
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 243 NNSLTRSPSQRTHRTSA 293
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-2|CAB54308.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.57
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 242
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 243 NNSLTRSPSQRTHRTSA 293
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z81121-1|CAB03351.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.57
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 242
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 243 NNSLTRSPSQRTHRTSA 293
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-14|CAB54254.2| 796|Caenorhabditis elegans Hypothetical
protein F49E11.1c protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.57
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 242
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 243 NNSLTRSPSQRTHRTSA 293
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z70308-13|CAA94353.1| 817|Caenorhabditis elegans Hypothetical
protein F49E11.1b protein.
Length = 817
Score = 32.3 bits (70), Expect = 0.57
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 242
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 243 NNSLTRSPSQRTHRTSA 293
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>AY090019-1|AAM09088.1| 796|Caenorhabditis elegans minibrain kinase
2 protein.
Length = 796
Score = 32.3 bits (70), Expect = 0.57
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 69 SPVRISSALSLSTVHHGRQVRS--SLRLHRSGPRSDGATRRSRLLQGHRTPHQGSSIRL* 242
+P S A S S+ HH S SL + G + A+ S L+QGHR P GS
Sbjct: 69 APTSFSGASSSSSNHHHPVYHSQNSLPPNLLGSSQNSASSNS-LVQGHRNPALGS----- 122
Query: 243 NNSLTRSPSQRTHRTSA 293
N+LTRS Q + S+
Sbjct: 123 GNTLTRSYHQPSSTNSS 139
>Z27079-8|CAA81595.2| 798|Caenorhabditis elegans Hypothetical
protein T05G5.8 protein.
Length = 798
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/81 (25%), Positives = 38/81 (46%)
Frame = -1
Query: 408 CSKASLGLAVRVSERSXGDSWRRRLSCCSTDSEPSFQALLKSCASFDLVSELNCCSKVLW 229
C++ S+ L ++S+R G + + + S Q L++ S + L SKV W
Sbjct: 502 CAETSIQLQEKLSQRIPGVDISQETEAFYSITNQSLQVLVQDVES-TCDAALQSISKVNW 560
Query: 228 NSLGVVFDVLEEVGSVASHHR 166
++ V D +GS+ +H R
Sbjct: 561 TAVDCVGDESPFIGSMRAHLR 581
>AC024813-3|AAK27881.1| 461|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform b protein.
Length = 461
Score = 29.9 bits (64), Expect = 3.0
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -1
Query: 375 VSERSXGDSWRRRLSCCSTDSE--PSFQALLKSCASFDLVSELNCCSKVLWNSLGVVFDV 202
++ R G +R S ST SE P A L SFD S+ S NSLG F
Sbjct: 188 IARRPQGSRRQRNDSINSTQSEMPPQTGAQLHIDTSFDSASQCGASSNFSMNSLGEAFS- 246
Query: 201 LEEVGSVASHHRSLGQSDAGEENYEL 124
EE+ + S+ S E + +
Sbjct: 247 FEEMCQNLQNFASMDWSKEVENEFAM 272
>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform a protein.
Length = 1241
Score = 29.9 bits (64), Expect = 3.0
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = -1
Query: 375 VSERSXGDSWRRRLSCCSTDSE--PSFQALLKSCASFDLVSELNCCSKVLWNSLGVVFDV 202
++ R G +R S ST SE P A L SFD S+ S NSLG F
Sbjct: 188 IARRPQGSRRQRNDSINSTQSEMPPQTGAQLHIDTSFDSASQCGASSNFSMNSLGEAFS- 246
Query: 201 LEEVGSVASHHRSLGQSDAGEENYEL 124
EE+ + S+ S E + +
Sbjct: 247 FEEMCQNLQNFASMDWSKEVENEFAM 272
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 151 ALAQGAMVRRDAPDFFKDIEHHTKGVP 231
A Q A DAP+FF+ + H +GVP
Sbjct: 26 ASTQAAAATDDAPNFFQKLAHRFQGVP 52
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 379 NGKAKGGFGTVEAEHRAHGRGAPARPTLN 465
+G A GGFG+ A + G GAP RP N
Sbjct: 572 SGGATGGFGSGPAYGGSFGGGAPRRPFTN 600
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 379 NGKAKGGFGTVEAEHRAHGRGAPARPTLN 465
+G A GGFG+ A + G GAP RP N
Sbjct: 556 SGGATGGFGSGPAYGGSFGGGAPRRPFTN 584
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 379 NGKAKGGFGTVEAEHRAHGRGAPARPTLN 465
+G A GGFG+ A + G GAP RP N
Sbjct: 553 SGGATGGFGSGPAYGGSFGGGAPRRPFTN 581
>Z93394-6|CAB61034.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 266 KSKDAQDFSKAWKDGSESVLQQLKRLRQESPXERSETRTARPREALEQSRQNIERTAEEL 445
K KDA D AW++G + +L + S S T +A + ++R+N +E L
Sbjct: 17 KKKDADDEKNAWEEGDFIDEKIHLKLSRGSTCTSSATSSAPSSTSSTRARRNWSVFSERL 76
Query: 446 RQ 451
R+
Sbjct: 77 RE 78
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 323 LQQLKRLRQE-SPXERSETRTARPREALEQSRQNIERTAEELRQ 451
L++++R R+E ER E R REA ++ RQ +E A E+R+
Sbjct: 462 LERIERERRELEARERQELELQR-REAEDRERQRLEDEAREMRR 504
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 323 LQQLKRLRQE-SPXERSETRTARPREALEQSRQNIERTAEELRQ 451
L++++R R+E ER E R REA ++ RQ +E A E+R+
Sbjct: 462 LERIERERRELEARERQELELQR-REAEDRERQRLEDEAREMRR 504
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 323 LQQLKRLRQE-SPXERSETRTARPREALEQSRQNIERTAEELRQ 451
L++++R R+E ER E R REA ++ RQ +E A E+R+
Sbjct: 462 LERIERERRELEARERQELELQR-REAEDRERQRLEDEAREMRR 504
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 323 LQQLKRLRQE-SPXERSETRTARPREALEQSRQNIERTAEELRQ 451
L++++R R+E ER E R REA ++ RQ +E A E+R+
Sbjct: 462 LERIERERRELEARERQELELQR-REAEDRERQRLEDEAREMRR 504
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical protein
T23F2.2b protein.
Length = 1538
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 233 KTLEQQ--FNSLTKSKDAQDFSKAWKDGSESVLQQLKRLRQESPXERSETRTARPREALE 406
K LE+ F+S +K D ++ WK+ S ++ +++ R+RQ + R + AL
Sbjct: 1164 KNLERSSSFSSFNHNKSEND-TQRWKEKSGTLFREVNRIRQNLAEALEQNNELRYQLALA 1222
Query: 407 QSRQNIERTAEE 442
+ + + E+
Sbjct: 1223 RGERELSSCIEK 1234
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical protein
T23F2.2a protein.
Length = 1534
Score = 28.7 bits (61), Expect = 7.0
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 233 KTLEQQ--FNSLTKSKDAQDFSKAWKDGSESVLQQLKRLRQESPXERSETRTARPREALE 406
K LE+ F+S +K D ++ WK+ S ++ +++ R+RQ + R + AL
Sbjct: 1164 KNLERSSSFSSFNHNKSEND-TQRWKEKSGTLFREVNRIRQNLAEALEQNNELRYQLALA 1222
Query: 407 QSRQNIERTAEE 442
+ + + E+
Sbjct: 1223 RGERELSSCIEK 1234
>AL117203-24|CAB61043.1| 766|Caenorhabditis elegans Hypothetical
protein Y48E1C.1b protein.
Length = 766
Score = 28.7 bits (61), Expect = 7.0
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 266 KSKDAQDFSKAWKDGSESVLQQLKRLRQESPXERSETRTARPREALEQSRQNIERTAEEL 445
K KDA D AW++G + +L + S S T +A + ++R+N +E L
Sbjct: 17 KKKDADDEKNAWEEGDFIDEKIHLKLSRGSTCTSSATSSAPSSTSSTRARRNWSVFSERL 76
Query: 446 RQ 451
R+
Sbjct: 77 RE 78
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 28.3 bits (60), Expect = 9.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 306 TAPSPCCNSSNAFAKSLQXSARRRERQGQGRLWNSRGRTSSA 431
TAP P +SS+ A+ L +++++G+ W+SR SA
Sbjct: 304 TAPPPDDSSSDPLARYLNRDYWQQKKEGKVEDWSSRSSALSA 345
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 147 HRSGPRSDGATRRSRLLQGHRTPHQGSSIRL 239
HR GP GAT R+L+ R P++ I L
Sbjct: 92 HRRGPADQGATYDERILEIRRDPNRTCHIAL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,955,230
Number of Sequences: 27780
Number of extensions: 233400
Number of successful extensions: 1084
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2678332928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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