Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L09
         (923 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    25   0.63 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   4.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   4.4  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 0.63
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 206 SPATTRPAPSSVHRGSPSPP 265
           +P T +P P+ V R  P PP
Sbjct: 249 NPPTPKPRPTKVSRRKPRPP 268


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 203 VSPATTRPAPSSVHRGSP 256
           VSP T+   P+  H GSP
Sbjct: 913 VSPLTSPRQPAETHAGSP 930


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 683 HPPFWTW 703
           HPP WTW
Sbjct: 52  HPPQWTW 58


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 313 EAQSKRGILTLKYPIEHGYHHQLG 384
           E    RG+   KYPI    H  LG
Sbjct: 360 ETDDFRGVSGTKYPILKAIHQTLG 383


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,574
Number of Sequences: 336
Number of extensions: 4764
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)