Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L09
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 148 5e-36
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 148 5e-36
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 148 5e-36
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 148 5e-36
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 148 5e-36
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 148 5e-36
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 148 5e-36
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 148 5e-36
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 147 1e-35
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 139 3e-33
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 112 4e-25
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 105 4e-23
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 105 4e-23
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 105 4e-23
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 105 4e-23
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 55 6e-08
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 39 0.006
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 36 0.041
AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein. 31 0.88
AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical ... 31 0.88
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 30 2.7
AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical... 30 2.7
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 30 2.7
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 148 bits (359), Expect = 5e-36
Identities = 103/208 (49%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 75 GIVTNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTP 131
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXD 720
+ +L + TH + G P ++L L + D
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRD 185
Query: 721 RLPH--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDI 213
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P G+VLDSGDGV+HTVPIYEG AL
Sbjct: 119 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 177 LRL-DLAGRDLTDYLMKI 193
Score = 62.5 bits (145), Expect = 4e-10
Identities = 73/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 91
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 92 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 147
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
V + + V+ T P + P AILR L G
Sbjct: 148 RTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 148 bits (359), Expect = 5e-36
Identities = 103/208 (49%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 75 GIVTNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTP 131
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXD 720
+ +L + TH + G P ++L L + D
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRD 185
Query: 721 RLPH--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDI 213
Score = 68.1 bits (159), Expect = 8e-12
Identities = 42/78 (53%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P GIVLDSGDGV+HTVPIYEG AL
Sbjct: 119 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 177 LRL-DLAGRDLTDYLMKI 193
Score = 62.1 bits (144), Expect = 5e-10
Identities = 72/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 91
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 92 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 147
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
+ + + V+ T P + P AILR L G
Sbjct: 148 RTTGIVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 148 bits (359), Expect = 5e-36
Identities = 103/208 (49%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 75 GIVTNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTP 131
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXD 720
+ +L + TH + G P ++L L + D
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRD 185
Query: 721 RLPH--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDI 213
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P G+VLDSGDGV+HTVPIYEG AL
Sbjct: 119 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 177 LRL-DLAGRDLTDYLMKI 193
Score = 62.5 bits (145), Expect = 4e-10
Identities = 73/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 91
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 92 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 147
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
V + + V+ T P + P AILR L G
Sbjct: 148 RTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (359), Expect = 5e-36
Identities = 103/208 (49%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 75 GIVTNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTP 131
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXD 720
+ +L + TH + G P ++L L + D
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRD 185
Query: 721 RLPH--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDI 213
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P G+VLDSGDGV+HTVPIYEG AL
Sbjct: 119 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 177 LRL-DLAGRDLTDYLMKI 193
Score = 62.5 bits (145), Expect = 4e-10
Identities = 73/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 91
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 92 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 147
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
V + + V+ T P + P AILR L G
Sbjct: 148 RTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 148 bits (359), Expect = 5e-36
Identities = 103/208 (49%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 75 GIVTNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTP 131
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXD 720
+ +L + TH + G P ++L L + D
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRD 185
Query: 721 RLPH--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDI 213
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P G+VLDSGDGV+HTVPIYEG AL
Sbjct: 119 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 177 LRL-DLAGRDLTDYLMKI 193
Score = 62.5 bits (145), Expect = 4e-10
Identities = 73/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 91
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 92 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 147
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
V + + V+ T P + P AILR L G
Sbjct: 148 RTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (359), Expect = 5e-36
Identities = 103/208 (49%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 75 GIVTNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTP 131
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXD 720
+ +L + TH + G P ++L L + D
Sbjct: 132 AMYVAIQAVLSLYASGRTTGIVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRD 185
Query: 721 RLPH--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDI 213
Score = 68.1 bits (159), Expect = 8e-12
Identities = 42/78 (53%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P GIVLDSGDGV+HTVPIYEG AL
Sbjct: 119 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 177 LRL-DLAGRDLTDYLMKI 193
Score = 62.1 bits (144), Expect = 5e-10
Identities = 72/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 91
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 92 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 147
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
+ + + V+ T P + P AILR L G
Sbjct: 148 RTTGIVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 148 bits (359), Expect = 5e-36
Identities = 103/208 (49%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 75 GIVTNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTP 131
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXD 720
+ +L + TH + G P ++L L + D
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRD 185
Query: 721 RLPH--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDI 213
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P G+VLDSGDGV+HTVPIYEG AL
Sbjct: 119 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 177 LRL-DLAGRDLTDYLMKI 193
Score = 62.5 bits (145), Expect = 4e-10
Identities = 73/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 91
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 92 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 147
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
V + + V+ T P + P AILR L G
Sbjct: 148 RTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 148 bits (359), Expect = 5e-36
Identities = 103/208 (49%), Positives = 115/208 (55%), Gaps = 4/208 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 75 GIVTNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTP 131
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXD 720
+ +L + TH + G P ++L L + D
Sbjct: 132 AMYVAIQAVLSLYASGRTTGVVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRD 185
Query: 721 RLPH--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 186 LTDYLMKILTERGYSFTTTAEREIVRDI 213
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P G+VLDSGDGV+HTVPIYEG AL
Sbjct: 119 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 176
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 177 LRL-DLAGRDLTDYLMKI 193
Score = 62.5 bits (145), Expect = 4e-10
Identities = 73/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 33 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 91
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 92 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 147
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
V + + V+ T P + P AILR L G
Sbjct: 148 RTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 206
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 207 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 249
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 147 bits (356), Expect = 1e-35
Identities = 99/205 (48%), Positives = 111/205 (54%), Gaps = 1/205 (0%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 15 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 73
Query: 364 GYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLP 543
G + HHTFYNELR+APE P LLTEA P P+ EK P
Sbjct: 74 GIVTNWD-DMEKIWHHTFYNELRIAPEEHPV-LLTEA-PLNPKSNREKMTQIMFETFNTP 130
Query: 544 RPCTSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSGPXPSSVLDLGWSRXDR 723
+ +L + + H + + P LDL
Sbjct: 131 AMYVNIQAVLSLYASGRTTGIVLDTGDG---VTHTVPIYEGYALPHAIQRLDLAGRDLTD 187
Query: 724 LPHEXXTERGYSFTTTAXREIVRDI 798
+ TERGY+FTTTA REIVRDI
Sbjct: 188 YMMKILTERGYTFTTTAEREIVRDI 212
Score = 68.1 bits (159), Expect = 8e-12
Identities = 43/85 (50%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P GIVLD+GDGV+HTVPIYEG AL
Sbjct: 118 KMTQIMFETFNTPAMYVN--IQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAI 175
Query: 686 PPFWTWAGRXLTDYLMXI-XPRGVT 757
AGR LTDY+M I RG T
Sbjct: 176 QRL-DLAGRDLTDYMMKILTERGYT 199
Score = 53.2 bits (122), Expect = 3e-07
Identities = 68/223 (30%), Positives = 84/223 (37%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 32 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 90
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYV S LYASG
Sbjct: 91 YNELRIAPEEH-PVLLTEAPLN-PKSNR-EKMTQIMFETFNTPAMYVNIQAVLS-LYASG 146
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
+ T + V+ T P + P AI R L G
Sbjct: 147 RTTGIVLDTGDGVTHT-VPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAE 205
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVA FE E+ +S +S PDGQVI
Sbjct: 206 REIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVI 248
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 139 bits (336), Expect = 3e-33
Identities = 99/205 (48%), Positives = 112/205 (54%), Gaps = 4/205 (1%)
Frame = +1
Query: 196 KAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGYH 372
+AGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 5 RAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV 63
Query: 373 HQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXPRXTGEKDDPDHV*DLQLPRPC 552
+ HHTFYNELRVAPE P LLTEA P P+ EK P
Sbjct: 64 TNWD-DMEKIWHHTFYNELRVAPEEHPV-LLTEA-PLNPKANREKMTQIMFETFNTPAMY 120
Query: 553 TSPXQGRALXCTPPXXXXXXXXXXXXWCLPHRTHLRRLXSG-PXPSSVLDLGWSRXDRLP 729
+ +L + TH + G P ++L L + D
Sbjct: 121 VAIQAVLSLYASGRTTGVVLDSGDGV------THTVPIYEGYALPHAILRLDLAGRDLTD 174
Query: 730 H--EXXTERGYSFTTTAXREIVRDI 798
+ + TERGYSFTTTA REIVRDI
Sbjct: 175 YLMKILTERGYSFTTTAEREIVRDI 199
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P G+VLDSGDGV+HTVPIYEG AL
Sbjct: 105 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 162
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 163 LRL-DLAGRDLTDYLMKI 179
Score = 62.5 bits (145), Expect = 4e-10
Identities = 73/223 (32%), Positives = 88/223 (39%), Gaps = 1/223 (0%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
PSIVGRPRHQG G + G + + P + + DDMEKIW
Sbjct: 19 PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT-NWDDMEKIWHHTF 77
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P PV +P + PK NR E+ + PAMYVA S LYASG
Sbjct: 78 YNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAIQAVLS-LYASG 133
Query: 597 SYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSHREGLLVHHHR* 776
V + + V+ T P + P AILR L G
Sbjct: 134 RTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 192
Query: 777 XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 193 REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 235
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 112 bits (269), Expect = 4e-25
Identities = 81/178 (45%), Positives = 92/178 (51%), Gaps = 3/178 (1%)
Frame = +1
Query: 274 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGYHHQLGMTWRRSGHHTFYNELRVAPEGAP 453
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHG + HHTFYNELRVAPE P
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD-DMEKIWHHTFYNELRVAPEEHP 59
Query: 454 XWLLTEAPPQXPRXTGEKDDPDHV*DLQLPRPCTSPXQGRALXCTPPXXXXXXXXXXXXW 633
LLTEA P P+ EK P + +L +
Sbjct: 60 V-LLTEA-PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGV- 116
Query: 634 CLPHRTHLRRLXSG-PXPSSVLDLGWSRXDRLPH--EXXTERGYSFTTTAXREIVRDI 798
TH + G P ++L L + D + + TERGYSFTTTA REIVRDI
Sbjct: 117 -----THTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI 169
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/78 (52%), Positives = 44/78 (56%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
KMTQIMFETFN+P G+VLDSGDGV+HTVPIYEG AL
Sbjct: 75 KMTQIMFETFNTPAMYVA--IQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAI 132
Query: 686 PPFWTWAGRXLTDYLMXI 739
AGR LTDYLM I
Sbjct: 133 LRL-DLAGRDLTDYLMKI 149
Score = 51.2 bits (117), Expect = 1e-06
Identities = 59/174 (33%), Positives = 69/174 (39%), Gaps = 1/174 (0%)
Frame = +3
Query: 384 DDMEKIWPPHLLQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAX 563
DDMEKIW P PV +P + PK NR E+ + PAMYVA
Sbjct: 37 DDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLN-PKANR-EKMTQIMFETFNTPAMYVAI 93
Query: 564 PGPCSRLYASGSYXRVSCSTPEMVSPTPYPSTKVXLWPXAILRFGLGLVAX*PTTS*XSH 743
S LYASG V + + V+ T P + P AILR L
Sbjct: 94 QAVLS-LYASGRTTGVVLDSGDGVTHT-VPIYEGYALPHAILRLDLAGRDLTDYLMKILT 151
Query: 744 REGLLVHHHR*XGNRS*HXEKXCYVALXFEQEMXXXXASXP-SRSLXTPDGQVI 902
G EK CYVAL FEQEM +S +S PDGQVI
Sbjct: 152 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVI 205
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 105 bits (252), Expect = 4e-23
Identities = 53/61 (86%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 G 366
G
Sbjct: 75 G 75
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 105 bits (252), Expect = 4e-23
Identities = 53/61 (86%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 G 366
G
Sbjct: 75 G 75
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 105 bits (252), Expect = 4e-23
Identities = 53/61 (86%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 G 366
G
Sbjct: 75 G 75
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 105 bits (252), Expect = 4e-23
Identities = 53/61 (86%), Positives = 54/61 (88%), Gaps = 1/61 (1%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALAT-RGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 363
GMCKAGFAGDDAPRAVF PS V +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH
Sbjct: 16 GMCKAGFAGDDAPRAVF-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH 74
Query: 364 G 366
G
Sbjct: 75 G 75
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 55.2 bits (127), Expect = 6e-08
Identities = 32/97 (32%), Positives = 52/97 (53%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALATRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 366
G+ KAGFAG+ P+ F VM G D ++G +A+S RG+ +++YP+EHG
Sbjct: 18 GVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHG 77
Query: 367 YHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAP 477
+ + + ++L++ PE P LLT+AP
Sbjct: 78 IVNNWSDMEKIWEYIFGQDQLKIFPEEHPV-LLTDAP 113
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALAQXH 685
+ +I FETFN P + G+VLDSGDGV+H VPI +G A+
Sbjct: 122 RSAEIFFETFNVPALYIQ--MQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAI 179
Query: 686 PPFWTWAGRXLTDYLMXIXPR 748
AGR +T+YL + R
Sbjct: 180 QRM-DLAGRDVTEYLRVLLRR 199
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 43.2 bits (97), Expect = 3e-04
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 608 GIVLDSGDGVSHTVPIYEGXALAQXHPPFWTWAGRXLTDYLMXI 739
G+V+DSGDGV+H P+YEG AL AGR +T YL+ +
Sbjct: 154 GVVVDSGDGVTHICPVYEGFALHHLTRRL-DIAGRDITKYLIKL 196
Score = 41.1 bits (92), Expect = 0.001
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVA--LATRGVMVGMGQ-KDSYVGDEAQSKRGILTLKYPI 357
G K G+AG + P +F PS V + VG + KD VG+E R +L + YP+
Sbjct: 16 GFVKCGYAGTNFPAHIF-PSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPM 74
Query: 358 EHGYHHQLGMTWRRSGH---HTFYNE-LRVAPEGAPXWLLTEAPPQXPRXTGEK 507
++G + W H HTF E L + P+ LLTE PP P EK
Sbjct: 75 DNG----IVRNWDDMAHVWDHTFGPEKLDIDPKECKL-LLTE-PPLNPNSNREK 122
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 38.7 bits (86), Expect = 0.006
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Frame = +1
Query: 187 GMCKAGFAGDDAPRAVFRPSWVALATR-------------GVMVGMGQKDSYVGDEAQSK 327
G K G+AG+ P+ + PS +A+ + V G+ D ++GDEA S
Sbjct: 16 GYTKLGYAGNTEPQFII-PSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGDEALSP 74
Query: 328 RGI-LTLKYPIEHGYHHQLGMTWRRSGHHTFYNELRVAPEGAPXWLLTEAPPQXP 489
T+KYPI HG + R + LR PE +LLTE P P
Sbjct: 75 AATNYTVKYPIRHGIVEDWDL-MERYWEQCIFKYLRAEPED-HFFLLTEPPLNTP 127
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Frame = +2
Query: 515 QIMFETFNSPG------HVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXALA 676
+IMFE+FN PG V G+V+DSGDGV+H +P+ +G +
Sbjct: 135 EIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIG 194
Query: 677 Q--XHPPFWTWAGRXLTDYLMXI 739
H P AGR +T ++ +
Sbjct: 195 SCIKHIPI---AGRDITYFIQSL 214
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 35.9 bits (79), Expect = 0.041
Identities = 38/140 (27%), Positives = 53/140 (37%)
Frame = +3
Query: 237 PSIVGRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARVSSPTGDDMEKIWPPHL 416
P G+P G+D Y P + R P + P R ++P G PP
Sbjct: 258 PGQAGKPGAPGKDANYCPCPQRQDDRTPPSSGTSAPQPPPRGSTAAP-GTRA----PPA- 311
Query: 417 LQ*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPPAMYVAXPGPCSRLYASG 596
P P A R+PP+ + + P P TP + Y + P P + S
Sbjct: 312 ---TRAPPATRAPPATTRAPPATTRPAPASQPP--VREPETPDSGYPS-PAPQEPAHPSP 365
Query: 597 SYXRVSCSTPEMVSPTPYPS 656
SY S +P SP+ YPS
Sbjct: 366 SYPSPSYPSPSYPSPS-YPS 384
>AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein.
Length = 167
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 420 Q*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPP 545
Q A +R++P+ +PPS PK P S PST P
Sbjct: 76 QSAVTPKKRASPIPPQPAPPSSPKPTEESATPSSSFAPSTEP 117
>AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical
protein T06A4.2 protein.
Length = 167
Score = 31.5 bits (68), Expect = 0.88
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 420 Q*AACRPRRSTPVAAHRSPPSXPKXNRGER*PRSCLRPSTPP 545
Q A +R++P+ +PPS PK P S PST P
Sbjct: 76 QSAVTPKKRASPIPPQPAPPSSPKPTEESATPSSSFAPSTEP 117
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 355 IEHGYHHQLGMTWRRSGHHTFYNELRVAPEGAPXW-LLTEAPPQXPRXTGEKDDPDHV*D 531
+E HH G RRS H +LR + + P W + E PP + +KD P HV D
Sbjct: 743 LEQNGHH--GQKLRRSQHGGSEMDLRRSTQEMPDWEKIYELPPHSSQIV-QKDMPRHV-D 798
Query: 532 LQ 537
+Q
Sbjct: 799 VQ 800
>AC024791-19|AAF60657.2| 618|Caenorhabditis elegans Hypothetical
protein Y47G6A.5a protein.
Length = 618
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 146 RRMLLRLVVDKWLPACARPVSPATTRPAPSSVHRGSPSPP 265
+ + LR V+ + P+ A P P RP+ SV P PP
Sbjct: 37 QELALRPVMPESTPSVAVPAKPPPLRPSTQSVSSTDPRPP 76
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 506 KMTQIMFETFNSPGHVRRHXXXXXXXXXXXXXPXGIVLDSGDGVSHTVPIYEGXAL 673
K+T+IMFE F P + G+++DSG + VP+++G A+
Sbjct: 141 KLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTH--GLMVDSGATQTSVVPVFDGYAV 194
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = -2
Query: 655 DGYGVGDTISGVEHD----TRWYXPEAYXREH 572
+GYG+GD S V +D WY +++ EH
Sbjct: 422 EGYGIGDDASSVAYDGCRQLVWYNAKSHKHEH 453
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,878,167
Number of Sequences: 27780
Number of extensions: 489450
Number of successful extensions: 1923
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1844
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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