Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L06
(963 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 112 1e-23
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 108 2e-22
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 106 7e-22
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 101 3e-20
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 87 5e-16
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 86 1e-15
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 83 8e-15
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 77 5e-13
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 76 2e-12
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 76 2e-12
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 71 4e-11
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 60 1e-07
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 59 2e-07
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 48 4e-04
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 47 6e-04
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 43 0.013
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 37 0.88
UniRef50_A4T064 Cluster: A/G-specific adenine glycosylase; n=1; ... 36 2.0
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 35 2.7
UniRef50_A3WXD2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.7
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 35 2.7
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 34 4.7
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 34 4.7
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 112 bits (270), Expect = 1e-23
Identities = 59/99 (59%), Positives = 71/99 (71%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGER 387
+VAAD LG + +GYV+R++GGNDKQGFP + G V + + PRR GER
Sbjct: 35 EVAADALGEEW-KGYVVRISGGNDKQGFPMKQGVLTHGRVRLL-LSKGHSCYRPRRTGER 92
Query: 388 KRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
KRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD VPR
Sbjct: 93 KRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPR 131
Score = 86.6 bits (205), Expect = 8e-16
Identities = 74/171 (43%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Frame = +2
Query: 170 KLRLFXAKAHGRRKSRLIS*AL--TWKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSD 340
KLR F K R + + + AL WKG Y V ++ K MKQG
Sbjct: 23 KLRTFYEK---RMATEVAADALGEEWKG--YVVRISGGNDKQGFPMKQGVLTHGRVRLLL 77
Query: 341 VKGPLMLQNRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGP 517
KG + R ER+ + V + + S L L+ + K + L + P RLGP
Sbjct: 78 SKGHSCYRPRRTGERKRKS--VRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGP 135
Query: 518 KRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
KRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKIQRLVTP
Sbjct: 136 KRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQRLVTP 182
Score = 33.9 bits (74), Expect = 6.2
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +1
Query: 745 AEYAKLLAQRXKESKVRRQEK 807
AEYAKLLA+R KE+K +RQE+
Sbjct: 207 AEYAKLLAKRMKEAKEKRQEQ 227
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 108 bits (259), Expect = 2e-22
Identities = 55/99 (55%), Positives = 69/99 (69%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGER 387
++ AD LG D +GYV ++AGGNDKQGFP + G T V + ++ PRR GER
Sbjct: 35 EITADHLG-DEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLL-LKKGHSCYRPRRTGER 92
Query: 388 KRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
KRKSVRGCIVD NLS LAL++V+KG ++IPGLTD V R
Sbjct: 93 KRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLR 131
Score = 88.6 bits (210), Expect = 2e-16
Identities = 71/170 (41%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Frame = +2
Query: 167 HKLRLFXAKAHGRRKSRLIS*ALTWKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDV 343
HKLR F K G + WKG Y +A K MKQG
Sbjct: 22 HKLRHFYDKRMGAEITA-DHLGDEWKG--YVFKIAGGNDKQGFPMKQGVLTNTRVRLLLK 78
Query: 344 KGPLMLQNRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRKFLD*LMEMYP-GRLGPK 520
KG + R ER+ + V + + S L L+ + K + L + RLGPK
Sbjct: 79 KGHSCYRPRRTGERKRKS--VRGCIVDQNLSALALIVVKKGEKDIPGLTDTTVLRRLGPK 136
Query: 521 RASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
RAS IRKL+NL+KEDDVR+YVVKR LP K+GK KPR KAPKIQRL+TP
Sbjct: 137 RASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK---KPRTKAPKIQRLITP 183
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 106 bits (255), Expect = 7e-22
Identities = 55/99 (55%), Positives = 68/99 (68%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGER 387
+V+ + LG D +GYV R+ GGNDKQGFP + G V + + PRR GER
Sbjct: 35 EVSGECLG-DEWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLL-LSKGHSCYRPRRTGER 92
Query: 388 KRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
KRKSVRGCIVD+ LSVL+LVIV+KG Q+IPGLTD +PR
Sbjct: 93 KRKSVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNTIPR 131
Score = 86.6 bits (205), Expect = 8e-16
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
P RLGPKR KIRK+FNLSKEDDVR+YV++R LP KEGK K + KAPKIQRLVTP
Sbjct: 130 PRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGK---KAKSKAPKIQRLVTP 183
Score = 34.3 bits (75), Expect = 4.7
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +1
Query: 745 AEYAKLLAQRXKESKVRRQEKDQTXGGQXSMRDS 846
A+YAKLLA+R KE+K +R E+ S+RDS
Sbjct: 208 ADYAKLLAKRAKEAKEKRHEQLMKKRRASSLRDS 241
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 101 bits (242), Expect = 3e-20
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG + +GYVL++ GGNDKQGFP G + V + ++ PR+DGE K
Sbjct: 36 VEADNLGEEY-KGYVLKITGGNDKQGFPMRQGVLFKGRVRIL-MRKGHKGYRPRKDGEMK 93
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKS+RGCIV ++ VLAL +V+KGA EI GLTD NVPR
Sbjct: 94 RKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPR 131
Score = 53.6 bits (123), Expect = 7e-06
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVT 667
P RLGPKR +K+R+LF K D V++ +++R K+GK+ R KAPKIQRLVT
Sbjct: 130 PRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKK----RQKAPKIQRLVT 184
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 87.4 bits (207), Expect = 5e-16
Identities = 45/93 (48%), Positives = 57/93 (61%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V D +G + GYV R+ GGNDKQGFP G V + ++ PR+ GE++
Sbjct: 77 VPGDSIGEEF-LGYVFRITGGNDKQGFPMMQGVLTNNRVRLL-FKKGMKCYRPRKKGEKR 134
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTD 489
RKSVRGCIV +LS L L +V+KG EIPGLTD
Sbjct: 135 RKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTD 167
Score = 64.1 bits (149), Expect = 5e-09
Identities = 33/54 (61%), Positives = 39/54 (72%)
Frame = +2
Query: 506 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVT 667
+LGPKRA+KIRKLFNL K DDVR+YV+ R + +N K R PKIQRLVT
Sbjct: 173 KLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-----SKNGKNRFIKPKIQRLVT 221
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 85.8 bits (203), Expect = 1e-15
Identities = 49/99 (49%), Positives = 62/99 (62%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGER 387
+V D LG D +GYV ++AGGNDK GFP + G + V + + + T RR G R
Sbjct: 35 EVEGDTLG-DEFKGYVFKIAGGNDKDGFPMKQGVMVRGRVRLLLSEGHSCFTS-RRSGFR 92
Query: 388 KRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
KRKSVRGCIV ++ VLAL IV+KG EI GLT +PR
Sbjct: 93 KRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPR 131
Score = 59.7 bits (138), Expect = 1e-07
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
P +LGPKRA+ I+KLF L KEDD +++ V++R +GK+ R K PKIQRL+TP
Sbjct: 130 PRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKD----RTKCPKIQRLITP 185
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 83.4 bits (197), Expect = 8e-15
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
+ ++LG +GY+ R+ GG DKQGFP + G + + + PR+DGERK
Sbjct: 36 IEGEKLGGQF-KGYLFRIGGGFDKQGFPMKQGVITPRRIRLL-LKTGASCYRPRKDGERK 93
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR---PSRSQT 522
RK+VRGCI+ +S L V+++KG +EI GLT VPR P R+ T
Sbjct: 94 RKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRAST 140
Score = 36.7 bits (81), Expect = 0.88
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLS-KEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVT 667
P R GPKRAS +R +F ++ + D + V+KR K GK +PK+QRL+T
Sbjct: 130 PRRFGPKRASTLRAMFGITDSKFDASKLVLKR--EVKPGK------FTSPKVQRLIT 178
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 77.4 bits (182), Expect = 5e-13
Identities = 42/92 (45%), Positives = 57/92 (61%)
Frame = +1
Query: 229 GADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERKRKSVRG 408
G +++R R GGNDKQG + + + + ++ PR+DGE KRKS+RG
Sbjct: 52 GEELQRNMCQRFTGGNDKQGVLFKG----RVRILM---RKGHKGYRPRKDGEMKRKSIRG 104
Query: 409 CIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
CIV ++ VLAL +V+KGA EI GLTD NVPR
Sbjct: 105 CIVGQDIRVLALQVVKKGANEIAGLTDQNVPR 136
Score = 46.4 bits (105), Expect = 0.001
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKE-GKEN-AKPRHKAPKIQRLVT 667
P RLGPKR +K+R+LF K D RV+ ++E G + K R KAPKIQRLVT
Sbjct: 135 PRRLGPKRLTKLRRLFGFKKAD--------RVISSEEHGPQRYGKKRQKAPKIQRLVT 184
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 75.8 bits (178), Expect = 2e-12
Identities = 42/98 (42%), Positives = 61/98 (62%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGER 387
+V A LG D +GY+L++ GG DK GFP TG + V + R +P R+GER
Sbjct: 34 EVDASSLG-DEFKGYILKITGGCDKDGFPMMTGVATNNRVRLLLDGR-NGCYKPLRNGER 91
Query: 388 KRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVP 501
+RK+VRG IV ++SVL ++V+KG EI G+T+ +P
Sbjct: 92 RRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALP 129
Score = 47.2 bits (107), Expect = 6e-04
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKR 592
P R GP+RAS RKLFNLS++DDV+++V++R
Sbjct: 129 PMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 75.8 bits (178), Expect = 2e-12
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
P RLGPKRASKIRKLFNLS+ +DVR+YVV+R + K GK K R KAPKIQRL+TP
Sbjct: 133 PRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGK---KDRLKAPKIQRLITP 185
Score = 62.5 bits (145), Expect = 2e-08
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +1
Query: 244 RGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRR-DGERKRKSVRGCIVD 420
+GY+ R+ GG+DK GFP G + V + + A R GER+RK+VRGC++
Sbjct: 47 KGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLA 106
Query: 421 ANLSVLALVIVRKGAQEIPGLTDGNVPR 504
++++++ + I + G Q I G+TD PR
Sbjct: 107 SDIALVNVTISKVGDQPIEGVTDTTAPR 134
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 70.9 bits (166), Expect = 4e-11
Identities = 39/86 (45%), Positives = 50/86 (58%)
Frame = +1
Query: 247 GYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERKRKSVRGCIVDAN 426
G R+ GGND QGFP G + Q A RR+GERKRKS+RGCIV +
Sbjct: 53 GCTFRITGGNDAQGFPMYQGVLKSQRARLLLRQGAKCYLH-RRNGERKRKSIRGCIVGPD 111
Query: 427 LSVLALVIVRKGAQEIPGLTDGNVPR 504
L L++V+V G + +PGLTD VP+
Sbjct: 112 LHALSVVLVDAGDKTLPGLTDVVVPK 137
Score = 38.3 bits (85), Expect = 0.29
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNL--SKEDDVRRYVVKRV---LPAKEGKENAKPRHKAPKIQRLV 664
P RL PKRASKIR+LF L +K D + +V + L + +N + + K PK+QR+V
Sbjct: 136 PKRLVPKRASKIRRLFGLPTTKVDPKDQMLVCELIKELGHEVTLKNGEKKLKYPKVQRVV 195
Query: 665 T 667
T
Sbjct: 196 T 196
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 59.7 bits (138), Expect = 1e-07
Identities = 36/88 (40%), Positives = 50/88 (56%)
Frame = +1
Query: 226 LGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERKRKSVR 405
LG + E G ++ + GG+D QGFP +G + V + RR G R+RKSVR
Sbjct: 26 LGEEFE-GTIMEITGGDDYQGFPMVSGHLTKKRVRPL-LSKGDAGYRCRRKGVRRRKSVR 83
Query: 406 GCIVDANLSVLALVIVRKGAQEIPGLTD 489
G IV + VL L+I+R G +EI GLT+
Sbjct: 84 GSIVSEEICVLNLIILRPGEKEIDGLTN 111
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 58.8 bits (136), Expect = 2e-07
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G + + ++ PR + RK
Sbjct: 36 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL--KKIHSCFHPRCNKVRK 92
Query: 391 RKSVRGCIVDANLSVLALVIVRK 459
K+VR V+AN+S L LV+++K
Sbjct: 93 CKTVRKYTVEANVSALTLVVLKK 115
Score = 34.3 bits (75), Expect = 4.7
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 649
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 48.0 bits (109), Expect = 4e-04
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLP-AKEGKENAKPRHKAPKIQRL 661
P +GPKRAS+IRKLFNLSKEDD + R + KR+ KE KE K + + K QRL
Sbjct: 91 PRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKE--KRQEQIAKRQRL 148
Score = 46.4 bits (105), Expect = 0.001
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQR----ATHVTEPRR 375
+VAAD LG + +GY++R++GGNDKQGFP + + + ++ T TEPR
Sbjct: 35 EVAADALGEEW-KGYMVRISGGNDKQGFPMKQDVLTHDRIHLLLREKDIPGLTDTTEPRH 93
Query: 376 DGERKRKSVR 405
G ++ +R
Sbjct: 94 VGPKRASRIR 103
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 47.2 bits (107), Expect = 6e-04
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPR-RDGE 384
K+ +G + ++ + + GG DKQGFP + G + V + + +T + + GE
Sbjct: 35 KIDGKIIGKEWDKSIFI-ITGGQDKQGFPMKEGILSPSRVKILLKKGSTGCRGYKMKKGE 93
Query: 385 RKRKSVRGCIVDANLSVLALVIV 453
R RKSVRGCIV +SVL + ++
Sbjct: 94 RCRKSVRGCIVSPEISVLNIKLL 116
Score = 34.3 bits (75), Expect = 4.7
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 518 KRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
KR+S +RK+ L+K DD+R++ +K AK+ K KIQRL+TP
Sbjct: 137 KRSSNLRKVLCLTKTDDIRKHYIK---IAKDFKNKV-------KIQRLITP 177
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 42.7 bits (96), Expect = 0.013
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +1
Query: 244 RGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERKRKSVRGCIVDA 423
+GY LR+ GG+DK GFP + T F T +P + G R+RK+VRG +
Sbjct: 43 KGYKLRITGGSDKNGFPMKEDVD-GTRRFKSLVNGGTGF-KPTKKGLRRRKTVRGNTIAD 100
Query: 424 NLSVLALVIVRKGAQEI 474
++S + + + +G Q +
Sbjct: 101 DISQINVKVSERGEQTL 117
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 36.7 bits (81), Expect = 0.88
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +1
Query: 235 DMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERKRKSVRGCI 414
D+ Y L++ GG D+ GFP TA P+ G RKRK VRG +
Sbjct: 43 DLPPDYELKITGGTDRDGFPMRPDLP-GTARRRLLLSGGVGF-RPKEKGLRKRKGVRGRV 100
Query: 415 VDANLSVLALVIVRKG 462
+ ++ + V+V+ G
Sbjct: 101 ISKDILQINTVVVKHG 116
>UniRef50_A4T064 Cluster: A/G-specific adenine glycosylase; n=1;
Polynucleobacter sp. QLW-P1DMWA-1|Rep: A/G-specific
adenine glycosylase - Polynucleobacter sp. QLW-P1DMWA-1
Length = 381
Score = 35.5 bits (78), Expect = 2.0
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 530 WKHVWDLDGRGTFPSVNPGISWAPLRTITR 441
W +W+++ T P NP + W PL+ + R
Sbjct: 328 WMQIWEVNAMKTIPFTNPNLKWVPLKQLGR 357
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 35.1 bits (77), Expect = 2.7
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V A LG + +G L + GG+D+ GFP PR GER+
Sbjct: 156 VPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPVKKRAL--LSGPPGFWPREKGERR 213
Query: 391 RKSVRGCIVDANLSVLALVIVRK 459
RK+VRG + ++ + IV++
Sbjct: 214 RKTVRGNTISEDIVQINTKIVKQ 236
>UniRef50_A3WXD2 Cluster: Putative uncharacterized protein; n=1;
Nitrobacter sp. Nb-311A|Rep: Putative uncharacterized
protein - Nitrobacter sp. Nb-311A
Length = 72
Score = 35.1 bits (77), Expect = 2.7
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = -1
Query: 423 GVNNTSTN*FTFSLSIAARFCNMSGPLTSEDEHGCLSGRPCFIRESLLVVAASD 262
G N TS N + S AR +SGP ED GC SG+ +R S +V +AS+
Sbjct: 11 GQNKTSQNTISISGGTPAR--KISGPCVDEDRQGC-SGQEARVRTSSIVGSASE 61
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 35.1 bits (77), Expect = 2.7
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 229 GADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERKRKSVRG 408
G ++ L++ GG DK GFP V + R PR GER++K+V G
Sbjct: 52 GEEIPADAKLKITGGTDKDGFPMRPDVHGPRRVKIL-LSRGPGF-RPRERGERRKKTVHG 109
Query: 409 CIVDANLSVLALVIV 453
+ N+ + + IV
Sbjct: 110 NTISPNIVQVNMKIV 124
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 34.3 bits (75), Expect = 4.7
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 649
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 66 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 34.3 bits (75), Expect = 4.7
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +1
Query: 247 GYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERKRKSVRGCIVDAN 426
GY L + GG+D GFP V PR GER+RK+VRG + +
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVL--LSGPPGFHPREKGERRRKTVRGNTITHD 203
Query: 427 LSVLALVIV 453
+ + VIV
Sbjct: 204 IVQINTVIV 212
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,263,593
Number of Sequences: 1657284
Number of extensions: 17214844
Number of successful extensions: 43939
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 42216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43883
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89407040613
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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