Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L06
(963 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1309 + 25669394-25669399,25669520-25669584,25670543-256706... 91 1e-18
03_03_0207 - 15455163-15455389,15455623-15455895,15455991-154560... 91 1e-18
01_01_0748 + 5788527-5788745,5788825-5789619,5790567-5790632,579... 30 2.4
10_07_0139 + 13327851-13327880,13327999-13329049,13329089-133296... 29 4.2
02_01_0295 - 1973115-1973404,1974138-1974663 29 4.2
03_01_0526 + 3956909-3957071,3957262-3957317,3957398-3957462,395... 29 5.5
07_01_0456 - 3461827-3462261,3462542-3462670,3462777-3462897,346... 29 7.3
02_04_0107 - 19804730-19805044 29 7.3
08_02_0642 + 19641263-19641990,19642077-19642484,19642585-19642636 28 9.6
02_05_0956 - 33064104-33066425 28 9.6
02_01_0325 - 2208480-2208674,2208772-2210609,2210980-2211109,221... 28 9.6
01_03_0274 - 14469601-14469951 28 9.6
>07_03_1309 +
25669394-25669399,25669520-25669584,25670543-25670600,
25670683-25670791,25670872-25671144,25671348-25671589
Length = 250
Score = 91.1 bits (216), Expect = 1e-18
Identities = 74/204 (36%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEP--RRDG 381
+V+ D LG + +GYV ++ GG DKQGFP + G V + R T RRDG
Sbjct: 35 EVSGDALGEEF-KGYVFKIMGGCDKQGFPMKQGVLTAGRVRLL-LHRGTPCFRGYGRRDG 92
Query: 382 ERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR---PSRSQTCFQNP*AVQP 552
ER+RKSVRGCIV +LSV+ LVIV+KG ++PGLTD PR P R+ + +
Sbjct: 93 ERRRKSVRGCIVSQDLSVINLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLSKD 152
Query: 553 *QRR*CTSLCRQTRAPSQGRKRKC*TQT*GT*DPEASHPW*FCSVDVIVSL*RKSVSLSA 732
R + R+T G+K + P ++ +K ++
Sbjct: 153 DDVRKYVNTYRRTFTTKNGKKVSKAPKI-----QRLVTPLTLQRKRARIADKKKRIAKKK 207
Query: 733 SPLKAEYAKLLAQRXKESKVRRQE 804
S AEY KLLAQR KE + RR E
Sbjct: 208 SE-AAEYQKLLAQRLKEQRERRSE 230
Score = 69.3 bits (162), Expect = 4e-12
Identities = 38/59 (64%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYV--VKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
P GPKRASKIRKLFNLSK+DDVR+YV +R K GK+ + KAPKIQRLVTP
Sbjct: 132 PRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKNGKKVS----KAPKIQRLVTP 186
>03_03_0207 -
15455163-15455389,15455623-15455895,15455991-15456099,
15456186-15456243,15457002-15457066,15457190-15457195
Length = 245
Score = 91.1 bits (216), Expect = 1e-18
Identities = 73/204 (35%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Frame = +1
Query: 208 KVAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEP--RRDG 381
+V+ D LG + +GYV ++ GG DKQGFP + G V + R T RRDG
Sbjct: 35 EVSGDALGEEF-KGYVFKIMGGCDKQGFPMKQGVLTSGRVRLL-LHRGTPCFRGYGRRDG 92
Query: 382 ERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR---PSRSQTCFQNP*AVQP 552
ER+RKSVRGCIV +LSV+ LVIV+KG ++PGLTD PR P R+ + +
Sbjct: 93 ERRRKSVRGCIVSQDLSVINLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLAKD 152
Query: 553 *QRR*CTSLCRQTRAPSQGRKRKC*TQT*GT*DPEASHPW*FCSVDVIVSL*RKSVSLSA 732
R + R+T G+K + P ++ ++ ++
Sbjct: 153 DDVRKYVNTYRRTFTTKNGKKVSKAPKI-----QRLVTPLTLQRKRARIAQKKQRIAKKK 207
Query: 733 SPLKAEYAKLLAQRXKESKVRRQE 804
S AEY KLLAQR KE + RR E
Sbjct: 208 SE-AAEYQKLLAQRLKEQRERRSE 230
Score = 68.1 bits (159), Expect = 1e-11
Identities = 37/59 (62%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYV--VKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
P GPKRASKIRKLFNL+K+DDVR+YV +R K GK+ + KAPKIQRLVTP
Sbjct: 132 PRMRGPKRASKIRKLFNLAKDDDVRKYVNTYRRTFTTKNGKKVS----KAPKIQRLVTP 186
>01_01_0748 +
5788527-5788745,5788825-5789619,5790567-5790632,
5791457-5791525,5792139-5792153
Length = 387
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 39 FXLCFFTGLAVRRAXPASQLQFNVSSPGNGTASQLVRKWVGTRTSF 176
F +FT L RR S + S GNGT VR + T+F
Sbjct: 270 FDNAYFTDLLSRRVLLRSDQELFGSGAGNGTTDAFVRAYAANATTF 315
>10_07_0139 +
13327851-13327880,13327999-13329049,13329089-13329648,
13329757-13329904,13330935-13331024,13331148-13331208,
13331301-13331450,13331571-13331629,13332148-13332282,
13333028-13333119,13333210-13333278
Length = 814
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/53 (24%), Positives = 32/53 (60%)
Frame = +2
Query: 506 RLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLV 664
++ PK+A ++ + + +DD+ R V + +P+++ + A+ ++PK +R V
Sbjct: 325 KVEPKKAHCSDRISHKTTQDDMERKVPSKYIPSEKKGKTAESCSRSPKRERRV 377
>02_01_0295 - 1973115-1973404,1974138-1974663
Length = 271
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEG 613
PGR+G + +KIRKL + ++D++ ++K +P K G
Sbjct: 217 PGRMGGTK-TKIRKLKIVKIDNDLKVVMIKGAVPGKPG 253
>03_01_0526 +
3956909-3957071,3957262-3957317,3957398-3957462,
3957560-3958006,3958102-3958227,3958328-3958511,
3958788-3958943
Length = 398
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -2
Query: 143 QLTGSPVARGRNVELQLTCGXSPANGKPSEKAKXERRHREVRQE 12
+L+ +P+ G E ++ CG + PSE+A E+ +E ++
Sbjct: 238 ELSSNPINEGDVAEKKVDCGCGTGDQVPSEEAIKEKSRQETAEK 281
>07_01_0456 -
3461827-3462261,3462542-3462670,3462777-3462897,
3463004-3463086,3463087-3463124,3463219-3464153,
3464407-3464655,3464738-3465195,3465793-3465885,
3466402-3466650
Length = 929
Score = 28.7 bits (61), Expect = 7.3
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Frame = -2
Query: 365 SVT*VAL*HQKTNTAVCQDAP-----VSFGNPCLSLPPATRST*PLSMSAPN*SAATFGA 201
+VT A+ HQK C V G P L+LP TRS S+ P + T G
Sbjct: 6 TVTPKAVIHQKYGAKACYSVEEVREAVDGGCPGLALPQQTRSVYRCSLDIPGLTVVTPGT 65
Query: 200 HALLRKXDEACAR 162
+ ++A A+
Sbjct: 66 FVRKKDAEQAAAQ 78
>02_04_0107 - 19804730-19805044
Length = 104
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 497 YPGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPA---KEGKENAKPRHKAPKIQR 658
+ GR G +R + R+ +++ VRR + V PA + G A P H+AP + R
Sbjct: 45 HQGRRGHRRRCQGRRAPSIAASHLVRRRRLVTVKPAAASRSGSLPASPHHRAPCVSR 101
>08_02_0642 + 19641263-19641990,19642077-19642484,19642585-19642636
Length = 395
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 867 AXWLELXGITH*XLTPXRLIFFLATHLGFL 778
A WLEL G TH + ++ LAT LG L
Sbjct: 144 AMWLELVGFTHWETSVITGLYLLATALGAL 173
>02_05_0956 - 33064104-33066425
Length = 773
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 607 LGWEHAFDDITTYIIFFAKV 548
+G EHA DD++TYII A V
Sbjct: 23 VGVEHATDDVSTYIIHVAHV 42
>02_01_0325 -
2208480-2208674,2208772-2210609,2210980-2211109,
2211231-2211270,2211409-2211531,2211940-2212030,
2212396-2212480,2212565-2212720,2212797-2212853,
2212940-2213110,2213313-2213330,2213479-2213551,
2213754-2213839,2214348-2214466,2214542-2214641
Length = 1093
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 318 LSGRPCFIRESLLVVAASDTKYIAPF 241
+SG+ F +S++VV AS T+++ PF
Sbjct: 304 VSGKRLFAGDSVIVVRASPTEFVIPF 329
>01_03_0274 - 14469601-14469951
Length = 116
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +1
Query: 217 ADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERKRK 396
AD ++ + L V G +D GFP E A TAV Q+ ++++ +
Sbjct: 26 ADAAPGEVPLSWELGVVGADDAFGFPGEEAADSATAVVRRVLQQGSYISYGALRRDTTPC 85
Query: 397 SVRG 408
SVRG
Sbjct: 86 SVRG 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,938,483
Number of Sequences: 37544
Number of extensions: 501752
Number of successful extensions: 1277
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2788108120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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