Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_L06
(963 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 109 4e-24
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 109 4e-24
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 109 4e-24
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 109 4e-24
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 109 4e-24
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 109 4e-24
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 109 4e-24
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 109 4e-24
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 59 1e-08
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 59 1e-08
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 34 0.25
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 34 0.25
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 34 0.25
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 34 0.25
AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p pro... 31 3.1
AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA... 31 3.1
BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p pro... 30 4.1
AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-P... 30 4.1
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 109 bits (263), Expect = 4e-24
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G V + ++ PRR GERK
Sbjct: 36 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLL-LKKGHSCYRPRRTGERK 93
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 94 RKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Score = 92.3 bits (219), Expect = 9e-19
Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 167 HKLRLFXAKAHGRRKSRLIS*ALTWKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDV 343
HKLR+F K G+ I WKG Y + +A K MKQG
Sbjct: 22 HKLRVFYEKRMGQVVEADIL-GDEWKG--YQLRIAGGNDKQGFPMKQGVLTHGRVRLLLK 78
Query: 344 KGPLMLQNRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGPK 520
KG + R ER+ + V + + S L L+ + K + L + P RLGPK
Sbjct: 79 KGHSCYRPRRTGERKRKS--VRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Query: 521 RASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
RASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TP
Sbjct: 137 RASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITP 183
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 709 RKSVSLSASPLKAEYAKLLAQRXKESKVRRQE 804
+K +++ A+YAKLL QR KESK +R+E
Sbjct: 196 KKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 109 bits (263), Expect = 4e-24
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G V + ++ PRR GERK
Sbjct: 36 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLL-LKKGHSCYRPRRTGERK 93
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 94 RKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Score = 92.3 bits (219), Expect = 9e-19
Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 167 HKLRLFXAKAHGRRKSRLIS*ALTWKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDV 343
HKLR+F K G+ I WKG Y + +A K MKQG
Sbjct: 22 HKLRVFYEKRMGQVVEADIL-GDEWKG--YQLRIAGGNDKQGFPMKQGVLTHGRVRLLLK 78
Query: 344 KGPLMLQNRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGPK 520
KG + R ER+ + V + + S L L+ + K + L + P RLGPK
Sbjct: 79 KGHSCYRPRRTGERKRKS--VRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Query: 521 RASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
RASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TP
Sbjct: 137 RASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITP 183
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 709 RKSVSLSASPLKAEYAKLLAQRXKESKVRRQE 804
+K +++ A+YAKLL QR KESK +R+E
Sbjct: 196 KKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 109 bits (263), Expect = 4e-24
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G V + ++ PRR GERK
Sbjct: 36 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLL-LKKGHSCYRPRRTGERK 93
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 94 RKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Score = 92.3 bits (219), Expect = 9e-19
Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 167 HKLRLFXAKAHGRRKSRLIS*ALTWKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDV 343
HKLR+F K G+ I WKG Y + +A K MKQG
Sbjct: 22 HKLRVFYEKRMGQVVEADIL-GDEWKG--YQLRIAGGNDKQGFPMKQGVLTHGRVRLLLK 78
Query: 344 KGPLMLQNRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGPK 520
KG + R ER+ + V + + S L L+ + K + L + P RLGPK
Sbjct: 79 KGHSCYRPRRTGERKRKS--VRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Query: 521 RASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
RASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TP
Sbjct: 137 RASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITP 183
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 709 RKSVSLSASPLKAEYAKLLAQRXKESKVRRQE 804
+K +++ A+YAKLL QR KESK +R+E
Sbjct: 196 KKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 109 bits (263), Expect = 4e-24
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G V + ++ PRR GERK
Sbjct: 36 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLL-LKKGHSCYRPRRTGERK 93
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 94 RKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Score = 92.3 bits (219), Expect = 9e-19
Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 167 HKLRLFXAKAHGRRKSRLIS*ALTWKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDV 343
HKLR+F K G+ I WKG Y + +A K MKQG
Sbjct: 22 HKLRVFYEKRMGQVVEADIL-GDEWKG--YQLRIAGGNDKQGFPMKQGVLTHGRVRLLLK 78
Query: 344 KGPLMLQNRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGPK 520
KG + R ER+ + V + + S L L+ + K + L + P RLGPK
Sbjct: 79 KGHSCYRPRRTGERKRKS--VRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Query: 521 RASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
RASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TP
Sbjct: 137 RASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITP 183
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 709 RKSVSLSASPLKAEYAKLLAQRXKESKVRRQE 804
+K +++ A+YAKLL QR KESK +R+E
Sbjct: 196 KKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 109 bits (263), Expect = 4e-24
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G V + ++ PRR GERK
Sbjct: 5 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLL-LKKGHSCYRPRRTGERK 62
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 63 RKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 100
Score = 87.4 bits (207), Expect = 3e-17
Identities = 64/146 (43%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Frame = +2
Query: 239 WKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDVKGPLMLQNRAAMERENVNQFVDVL 415
WKG Y + +A K MKQG KG + R ER+ + V
Sbjct: 14 WKG--YQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKS--VRGC 69
Query: 416 LTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGPKRASKIRKLFNLSKEDDVRRYVVKR 592
+ + S L L+ + K + L + P RLGPKRASKIRKL+NLSKEDDVRR+VV+R
Sbjct: 70 IVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRR 129
Query: 593 VLPAKEGKENAKPRHKAPKIQRLVTP 670
LPA K+N K KAPKIQRL+TP
Sbjct: 130 PLPA---KDNKKATSKAPKIQRLITP 152
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 709 RKSVSLSASPLKAEYAKLLAQRXKESKVRRQE 804
+K +++ A+YAKLL QR KESK +R+E
Sbjct: 165 KKKRQIASKEASADYAKLLVQRKKESKAKREE 196
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 109 bits (263), Expect = 4e-24
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G V + ++ PRR GERK
Sbjct: 5 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLL-LKKGHSCYRPRRTGERK 62
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 63 RKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 100
Score = 87.4 bits (207), Expect = 3e-17
Identities = 64/146 (43%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Frame = +2
Query: 239 WKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDVKGPLMLQNRAAMERENVNQFVDVL 415
WKG Y + +A K MKQG KG + R ER+ + V
Sbjct: 14 WKG--YQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKS--VRGC 69
Query: 416 LTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGPKRASKIRKLFNLSKEDDVRRYVVKR 592
+ + S L L+ + K + L + P RLGPKRASKIRKL+NLSKEDDVRR+VV+R
Sbjct: 70 IVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRFVVRR 129
Query: 593 VLPAKEGKENAKPRHKAPKIQRLVTP 670
LPA K+N K KAPKIQRL+TP
Sbjct: 130 PLPA---KDNKKATSKAPKIQRLITP 152
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 709 RKSVSLSASPLKAEYAKLLAQRXKESKVRRQE 804
+K +++ A+YAKLL QR KESK +R+E
Sbjct: 165 KKKRQIASKEASADYAKLLVQRKKESKAKREE 196
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 109 bits (263), Expect = 4e-24
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G V + ++ PRR GERK
Sbjct: 39 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLL-LKKGHSCYRPRRTGERK 96
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 97 RKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 134
Score = 92.3 bits (219), Expect = 9e-19
Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 167 HKLRLFXAKAHGRRKSRLIS*ALTWKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDV 343
HKLR+F K G+ I WKG Y + +A K MKQG
Sbjct: 25 HKLRVFYEKRMGQVVEADIL-GDEWKG--YQLRIAGGNDKQGFPMKQGVLTHGRVRLLLK 81
Query: 344 KGPLMLQNRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGPK 520
KG + R ER+ + V + + S L L+ + K + L + P RLGPK
Sbjct: 82 KGHSCYRPRRTGERKRKS--VRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 139
Query: 521 RASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
RASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TP
Sbjct: 140 RASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITP 186
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 709 RKSVSLSASPLKAEYAKLLAQRXKESKVRRQE 804
+K +++ A+YAKLL QR KESK +R+E
Sbjct: 199 KKKRQIASKEASADYAKLLVQRKKESKAKREE 230
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 109 bits (263), Expect = 4e-24
Identities = 57/98 (58%), Positives = 70/98 (71%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G V + ++ PRR GERK
Sbjct: 36 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLL-LKKGHSCYRPRRTGERK 93
Query: 391 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPR 504
RKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PR
Sbjct: 94 RKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPR 131
Score = 92.3 bits (219), Expect = 9e-19
Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 167 HKLRLFXAKAHGRRKSRLIS*ALTWKGAMYFVSLAATTSKDS-RMKQGRPDKQPCSSSDV 343
HKLR+F K G+ I WKG Y + +A K MKQG
Sbjct: 22 HKLRVFYEKRMGQVVEADIL-GDEWKG--YQLRIAGGNDKQGFPMKQGVLTHGRVRLLLK 78
Query: 344 KGPLMLQNRAAMERENVNQFVDVLLTPISRSWLLLLCARVPRKFLD*LMEM-YPGRLGPK 520
KG + R ER+ + V + + S L L+ + K + L + P RLGPK
Sbjct: 79 KGHSCYRPRRTGERKRKS--VRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPK 136
Query: 521 RASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRLVTP 670
RASKIRKL+NLSKEDDVRR+VV+R LPA K+N K KAPKIQRL+TP
Sbjct: 137 RASKIRKLYNLSKEDDVRRFVVRRPLPA---KDNKKATSKAPKIQRLITP 183
Score = 35.5 bits (78), Expect = 0.11
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 709 RKSVSLSASPLKAEYAKLLAQRXKESKVRRQE 804
+K +++ A+YAKLL QR KESK +R+E
Sbjct: 196 KKKRQIASKEASADYAKLLVQRKKESKAKREE 227
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 58.8 bits (136), Expect = 1e-08
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G + + ++ PR + RK
Sbjct: 36 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL--KKIHSCFHPRCNKVRK 92
Query: 391 RKSVRGCIVDANLSVLALVIVRK 459
K+VR V+AN+S L LV+++K
Sbjct: 93 CKTVRKYTVEANVSALTLVVLKK 115
Score = 34.3 bits (75), Expect = 0.25
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 649
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 58.8 bits (136), Expect = 1e-08
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 211 VAADQLGADMERGYVLRVAGGNDKQGFPNETGAS*QTAVFVF*CQRATHVTEPRRDGERK 390
V AD LG D +GY LR+AGGNDKQGFP + G + + ++ PR + RK
Sbjct: 36 VEADILG-DEWKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL--KKIHSCFHPRCNKVRK 92
Query: 391 RKSVRGCIVDANLSVLALVIVRK 459
K+VR V+AN+S L LV+++K
Sbjct: 93 CKTVRKYTVEANVSALTLVVLKK 115
Score = 34.3 bits (75), Expect = 0.25
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 649
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 34.3 bits (75), Expect = 0.25
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 649
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 68 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 110
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 367 PRRDGERKRKSVRGCIVDANLSVLALVIVRK 459
PR + RK K+VR V+AN+S L LV+++K
Sbjct: 34 PRCNKVRKCKTVRKYTVEANVSALTLVVLKK 64
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 34.3 bits (75), Expect = 0.25
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 649
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 66 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 367 PRRDGERKRKSVRGCIVDANLSVLALVIVRK 459
PR + RK K+VR V+AN+S L LV+++K
Sbjct: 32 PRCNKVRKCKTVRKYTVEANVSALTLVVLKK 62
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 34.3 bits (75), Expect = 0.25
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 649
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 367 PRRDGERKRKSVRGCIVDANLSVLALVIVRK 459
PR + RK K+VR V+AN+S L LV+++K
Sbjct: 20 PRCNKVRKCKTVRKYTVEANVSALTLVVLKK 50
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 34.3 bits (75), Expect = 0.25
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 500 PGRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 649
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 96
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 367 PRRDGERKRKSVRGCIVDANLSVLALVIVRK 459
PR + RK K+VR V+AN+S L LV+++K
Sbjct: 20 PRCNKVRKCKTVRKYTVEANVSALTLVVLKK 50
>AY075483-1|AAL68293.1| 313|Drosophila melanogaster RE39480p
protein.
Length = 313
Score = 30.7 bits (66), Expect = 3.1
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 524 ASKIRKLFNL-SKEDDVRRYVVKRVLPAKEGKEN 622
+ KIRK F++ SK D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>AE013599-905|AAF58912.1| 313|Drosophila melanogaster CG12926-PA
protein.
Length = 313
Score = 30.7 bits (66), Expect = 3.1
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 524 ASKIRKLFNL-SKEDDVRRYVVKRVLPAKEGKEN 622
+ KIRK F++ SK D + +YV K LPA+ G N
Sbjct: 223 SEKIRKRFHIHSKLDSLYKYVPKECLPAEYGGSN 256
>BT025110-1|ABE73281.1| 320|Drosophila melanogaster IP10506p
protein.
Length = 320
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -2
Query: 485 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLSPSRRGSV 360
V PG+ W PLR E LA H D+ F++ + SV
Sbjct: 33 VPPGVVWYPLRDFIPGSAEALAHLAHLGKDVTFVTNNSISSV 74
>AE014298-1708|AAF48109.2| 320|Drosophila melanogaster CG10352-PA
protein.
Length = 320
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -2
Query: 485 VNPGISWAPLRTITRAKTERLASTIHPRTDLRFLSPSRRGSV 360
V PG+ W PLR E LA H D+ F++ + SV
Sbjct: 33 VPPGVVWYPLRDFIPGSAEALAHLAHLGKDVTFVTNNSISSV 74
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,354,236
Number of Sequences: 53049
Number of extensions: 796120
Number of successful extensions: 2224
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2198
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4812612705
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -