Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L03
         (975 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0021 - 5049705-5049713,5049744-5049770,5049877-5049940,505...    29   4.2  
05_06_0202 - 26339467-26339494,26339579-26339624,26339742-263397...    29   5.6  
06_02_0303 + 14022428-14022652,14023247-14024159,14024310-140247...    29   7.4  
11_06_0228 + 21497248-21498143,21499831-21501700,21501934-215020...    28   9.8  
02_01_0031 - 187798-187887,187996-188179,188468-188640,188917-18...    28   9.8  

>03_02_0021 -
           5049705-5049713,5049744-5049770,5049877-5049940,
           5050019-5050806,5050888-5051046,5051778-5052419
          Length = 562

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 17/52 (32%), Positives = 22/52 (42%)
 Frame = -2

Query: 818 WQRCYSQADASSRYSTLCSKLXSLXXAFRATDPRHEPVVRXFLXEYXSSCHP 663
           WQ       A S Y ++   L  L    R T    +   R FL ++ SSCHP
Sbjct: 491 WQLKQGAPSAGSSYHSMPYGLDLLSRGKRNTGDGGDKEGRCFLVKFGSSCHP 542


>05_06_0202 -
           26339467-26339494,26339579-26339624,26339742-26339785,
           26340729-26340851,26341010-26341124,26341447-26342207,
           26342305-26342711,26342798-26342900,26344642-26345144
          Length = 709

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +3

Query: 315 RRSPXNXING--GSHLGTXRDESQSQIRGPKSQTIYRKMQEN 434
           RR P     G  G+ +G  R  S+   RG +SQT YR   +N
Sbjct: 204 RRRPRGRFRGRGGAPVGKVRGGSRDNFRGNRSQTYYRDGAKN 245


>06_02_0303 +
           14022428-14022652,14023247-14024159,14024310-14024700,
           14024949-14025206,14025284-14025394,14025486-14025564,
           14025842-14026027
          Length = 720

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 764 CTECYNDCSHQLGNSIAASIIRGLRSNXPXRSWYSH 871
           C   +N+C HQLG       + GL  N    +W  H
Sbjct: 683 CYFIHNECCHQLGRFFDKEGLLGLPENDILSNWSKH 718


>11_06_0228 +
           21497248-21498143,21499831-21501700,21501934-21502038,
           21502139-21502232,21502335-21502363
          Length = 997

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 407 LRFWSPDLALAFIPXSSQM*TPIDGIXWASSVAFLQD 297
           LRF   D+ALAF+  +  M T I+   WAS      D
Sbjct: 850 LRFCRMDIALAFLQGAMPMLTQIELYLWASEYCAATD 886


>02_01_0031 -
           187798-187887,187996-188179,188468-188640,188917-189399,
           189557-190213,190821-190837,191501-192041
          Length = 714

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 646 LNSGVDDCSESQDLVVAFLRRSLTQLGAFXIGLVKTGQ 533
           + +G+  C ES+D+ + +LR  LT L       V  G+
Sbjct: 223 MQTGLRSCPESEDMWIEYLRMELTYLNKLKARKVALGE 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,221,337
Number of Sequences: 37544
Number of extensions: 478401
Number of successful extensions: 1017
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)