Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP05_F_L01
         (871 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p...    31   1.4  
Z93785-1|CAB07858.1|  495|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC024777-1|AAF60563.1|  133|Caenorhabditis elegans Hypothetical ...    29   5.7  
AF099923-3|AAN63403.1|  784|Caenorhabditis elegans Ferm domain (...    28   10.0 
AF099923-2|AAM48544.1|  814|Caenorhabditis elegans Ferm domain (...    28   10.0 
AF099923-1|AAM48545.1|  853|Caenorhabditis elegans Ferm domain (...    28   10.0 
AF077540-3|AAC26312.2|  421|Caenorhabditis elegans C-type lectin...    28   10.0 
AF022982-4|AAB69938.1|  296|Caenorhabditis elegans Dnaj domain (...    28   10.0 

>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
           protein C56C10.12 protein.
          Length = 1599

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 668 VPPRNSQLPRSAS-IAAAEKHTNTRVVPSRAV 576
           +PPR+   PRS S +A + K + T V P R+V
Sbjct: 103 IPPRSMIFPRSTSMVAESRKESTTAVAPKRSV 134


>Z93785-1|CAB07858.1|  495|Caenorhabditis elegans Hypothetical
           protein W09D10.1 protein.
          Length = 495

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -3

Query: 653 SQLPRSASIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSRRGPMLMPDVNPNPSR*PSRKL 474
           SQLP+S S A  +  T    + SR     +G +T + +   P L+   +P  S  P++K 
Sbjct: 140 SQLPKSLSQAQKKVGTPVVNIASRGSSSSNGHSTASAAAAAPSLLDFSDPPASTTPAKKA 199

Query: 473 V 471
           V
Sbjct: 200 V 200


>AC024777-1|AAF60563.1|  133|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.2 protein.
          Length = 133

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +1

Query: 715 LFMQSHFLYQAXLYLGLMLMCGFVLFDTQLIIEKRR--MGSXDXVQXAXELFID 870
           +F+   FLY     LG +L   ++  D QLI+  RR  +   + +  A  +F+D
Sbjct: 65  IFLNWQFLYIVYAVLGALLCMFYLAIDIQLIMGGRRVEISPEEYIFAATHVFVD 118


>AF099923-3|AAN63403.1|  784|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 8,
           isoform c protein.
          Length = 784

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 454 PDNGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPS 567
           PD  +  ++R G  +GFG  +   +  ++++VS   PS
Sbjct: 90  PDGKRTVSIRRGKDIGFGFVAAGQLPTIIQFVSPEGPS 127


>AF099923-2|AAM48544.1|  814|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 8,
           isoform a protein.
          Length = 814

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 454 PDNGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPS 567
           PD  +  ++R G  +GFG  +   +  ++++VS   PS
Sbjct: 90  PDGKRTVSIRRGKDIGFGFVAAGQLPTIIQFVSPEGPS 127


>AF099923-1|AAM48545.1|  853|Caenorhabditis elegans Ferm domain
           (protein4.1-ezrin-radixin-moesin) family protein 8,
           isoform b protein.
          Length = 853

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 454 PDNGKNTNLRLGYLLGFGLTSGMSMGPLLEYVSVVDPS 567
           PD  +  ++R G  +GFG  +   +  ++++VS   PS
Sbjct: 129 PDGKRTVSIRRGKDIGFGFVAAGQLPTIIQFVSPEGPS 166


>AF077540-3|AAC26312.2|  421|Caenorhabditis elegans C-type lectin
           protein 21 protein.
          Length = 421

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +3

Query: 477 LTTRLSTWIWINIRHEHGSPP*ICQCS*PIYHNNCSARHYPGICML 614
           +T   +T  WI+ ++E+G  P +C+    I  ++C   +Y G C +
Sbjct: 128 VTVNTTTGYWISTKYENGMYPFVCEMPTTI-EDDCQ-NNYNGYCYI 171


>AF022982-4|AAB69938.1|  296|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 22 protein.
          Length = 296

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +1

Query: 220 QXSKKKNMNTINFQTFVNSFQNRLEPPVRQHLKNVYATLMMT 345
           Q +KKK  +  NF+  + + + +LE  V + +K   ATLM T
Sbjct: 127 QQAKKKKTDQRNFKEEIEAIRRQLEKEVNEEVKQ-KATLMKT 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,106,657
Number of Sequences: 27780
Number of extensions: 342111
Number of successful extensions: 849
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)