Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP05_F_K24
(870 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 32 0.43
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 32 0.43
At1g64255.1 68414.m07280 SWIM zinc finger family protein contain... 32 0.57
At1g69390.1 68414.m07966 chloroplast division protein, putative ... 30 2.3
At4g15260.1 68417.m02338 UDP-glucoronosyl/UDP-glucosyl transfera... 28 7.1
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A... 28 7.1
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A... 28 7.1
At1g23770.1 68414.m02999 F-box family protein contains Pfam PF00... 28 7.1
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 142 ELSADTSNQDLE-EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRR 309
+L + NQ E EKL+ NS L+ Y ++ S ++E+Q K + QNV ++DK R
Sbjct: 285 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLR 343
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 142 ELSADTSNQDLE-EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRR 309
+L + NQ E EKL+ NS L+ Y ++ S ++E+Q K + QNV ++DK R
Sbjct: 286 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLR 344
>At1g64255.1 68414.m07280 SWIM zinc finger family protein contains
Pfam profile PF04434: SWIM zinc finger
Length = 750
Score = 31.9 bits (69), Expect = 0.57
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 289 LIIDKRRNTMEYCYKLWVGNGQEIVRKYFPLNF 387
+++D + EY KL + +G + KYFPL F
Sbjct: 386 IVVDTKNLNCEYQLKLMIASGVDAANKYFPLAF 418
>At1g69390.1 68414.m07966 chloroplast division protein, putative
(MinE1) identical to chloroplast division protein
homolog MinE1 GI:17511220 from [Arabidopsis thaliana]
Length = 229
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 115 MLAASAGVVELSADTSNQDLEEKLYNSILTGDYD 216
+LA + G ELS + Q++E LYN+I G +D
Sbjct: 70 VLARNTGDYELSPSPAEQEIESFLYNAINMGFFD 103
>At4g15260.1 68417.m02338 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 359
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = -3
Query: 526 DEFSMLVYTIAVGNSLIRGIGCGT-ELQSEVVVSVNDLDIVSGHDEF*SLMGSTF*QFPV 350
+EF + Y I N+ GI E+ + V+DLD EF L +PV
Sbjct: 11 NEFGVPCYMIYTSNATFLGITLHVQEMYDDKKYDVSDLDESVNELEFPCLTRP----YPV 66
Query: 349 RCRPTACSSTPW 314
+C P SS W
Sbjct: 67 KCLPHILSSKDW 78
>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 390
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 181 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLII 297
K+ + IL+G D A EY Q K IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 497
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 181 KLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLII 297
K+ + IL+G D A EY Q K IQN++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At1g23770.1 68414.m02999 F-box family protein contains Pfam
PF00646: F-box domain; similar to F-box only protein 7
(SP:Q9Y3I1) {Homo sapiens} ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 350
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 164 LEVSADSSTTPALAASMHIANTTRSFILL--GAFQIAFKSAIKS*GIPYS 21
LE S D+S ALA S+H F+LL G+ + +F + S + Y+
Sbjct: 54 LEKSGDTSDLTALALSVHAVMLESGFVLLDHGSDKFSFSKKLLSVSLRYT 103
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,582,965
Number of Sequences: 28952
Number of extensions: 324086
Number of successful extensions: 873
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2038669600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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